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SCNpilot_cont_500_bf_scaffold_769_177

Organism: SCNPILOT_CONT_500_BF_Mesorhizobium_64_28

partial RP 27 / 55 MC: 1 BSCG 29 / 51 ASCG 10 / 38 MC: 2
Location: 172307..173167

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HLV5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 79.2
  • Coverage: 279.0
  • Bit_score: 447
  • Evalue 8.60e-123
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.2
  • Coverage: 279.0
  • Bit_score: 447
  • Evalue 1.20e-122
RNA polymerase sigma-32 subunit RpoH; K03089 RNA polymerase sigma-32 factor similarity KEGG
DB: KEGG
  • Identity: 77.4
  • Coverage: 283.0
  • Bit_score: 434
  • Evalue 2.40e-119
  • rbh

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Taxonomy

Mesorhizobium alhagi → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 861
ATGAACGAAGACTCAGCCAGGCGGAGCATGATCCGCGCGGCGATGCGGGCCCCTTATCTCGAACGTTCCGAGGAGCATGACCTCGCGGTGCGCTGGAAGGAAGATCACGACCAGGAGGCCCTACACCGCATCACCACCGCGCATATGCGGCTCGTCATTTCCATGGCGGCGAAGTTCCGCCATTTCGGGCTTTCCATGAGCGACCTCATCCAGGAGGGGCATGTCGGCCTGCTTGAAGCCGCTGCCCGGTTCGAGCCGGATCGGGACGTCCGCTTCTCCACCTATGCGACATGGTGGATCCGTGCCTCCATCCAGGATTATATCCTGCGCAACTGGTCGATCGTCCGCGGCGGGACGAGTTCCGCCCAGAAGGCGCTGTTCTTCAATCTCCGCCGCCTGAGGGCCCGCCTGGCCCAGGGATCGGAATTGCTTTCGAGCGCCGCCGTCTATCACGAGATCGCCGCCGCGCTCGGCGTCCCCGAAGCGGACGTGGCGATGATGGATTCGCGACTGTCGGGGCCCGACGCCTCGCTCAACGTTCCGCTCGGCGACGAGAGCGGAGCCGCCTCCGACCGGCAGGATTTCCTCGTCTCGGACGATCCGCTCCCCGACGAGGTCGTTGGCGACACAATCGATTTCGAGCGCCGCTCCGGCTGGCTGAACACGGCGCTCGGCGCGCTCAACGAACGTGAATTGAAGATCATCCGGGAGCGGCGCCTTCGCGAGGAAGGTGCCACGCTCGAATCGCTGGGCGCGCGTCTCGGCATCTCCAAGGAGCGGGTACGCCAGATCGAAAACCGCGCGCTCGAAAAGTTGAGGGTTGCGCTGGTGAGGGAAAATCCCGAACTCGCCGTGCTTTGA
PROTEIN sequence
Length: 287
MNEDSARRSMIRAAMRAPYLERSEEHDLAVRWKEDHDQEALHRITTAHMRLVISMAAKFRHFGLSMSDLIQEGHVGLLEAAARFEPDRDVRFSTYATWWIRASIQDYILRNWSIVRGGTSSAQKALFFNLRRLRARLAQGSELLSSAAVYHEIAAALGVPEADVAMMDSRLSGPDASLNVPLGDESGAASDRQDFLVSDDPLPDEVVGDTIDFERRSGWLNTALGALNERELKIIRERRLREEGATLESLGARLGISKERVRQIENRALEKLRVALVRENPELAVL*