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SCNpilot_cont_500_bf_scaffold_474_32

Organism: SCNPILOT_CONT_500_BF_Actinobacteria_69_13

partial RP 37 / 55 BSCG 38 / 51 ASCG 12 / 38 MC: 1
Location: comp(42000..43019)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XG81_NAKMY similarity UNIREF
DB: UNIREF100
  • Identity: 84.8
  • Coverage: 323.0
  • Bit_score: 527
  • Evalue 1.30e-146
  • rbh
RNA polymerase sigma factor SigB; K03087 RNA polymerase nonessential primary-like sigma factor similarity KEGG
DB: KEGG
  • Identity: 84.8
  • Coverage: 323.0
  • Bit_score: 527
  • Evalue 4.20e-147
  • rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; Flags: Precursor;; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.8
  • Coverage: 323.0
  • Bit_score: 527
  • Evalue 1.90e-146

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Taxonomy

Nakamurella multipartita → Nakamurella → Nakamurellales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1020
ATGGCAGCTTCCCAAACACTGGCAACACCGTTGGCGGCCCGCGATCCGGAGTCCGCTCACACGACGGCGTGGGCTGCGGCACGCGACATCGAAGATCTCGACGCGCAGGGACCGGCGGCCGATCTGGTTCGCGTGTATTTGAACGGCATCGGGCGGACGCAGCTGCTCACCGCCGAACAAGAGGTAAAACTCGCGAAGCGCATCGAGGCCGGTGTGTTCGCGCAGCACAAGCTGGAAACCGAGAAGCGCATCTCGCCGACTCGCCGCGCGGACCTCAAGGCGATCGTCCGCGATGGCAATCGCGCGCGTAGTCACCTGCTGGTGGCGAACCTGCGGTTGGTCGTGTCGCTGGCGAAGCGGTACACCGGCCGCGGCATGCCCCTTTTGGACCTCATCCAGGAAGGCAACCTCGGTCTGATCCGCGCCGTCGAGAAGTTCGACTACACCAAGGGCTTCAAATTCTCCACCTACGCGACATGGTGGATCCGGCAAGCGGTTTCGCGCGGCATGGCCGACCAGGCGCGGACCATCCGACTGCCGGTGCATCTGGTGGAGCAGGTGAACAAGCTGTCCCGGCTCAAGCGCGAGTTGCACCAGCAGCTGGGGCGGGACGCGACCCTCGACGAACTCGCCGAGGAGTCCGGCATCCCGTCGGACAAGATCGCCGACCTGCTGGACCACGCGCGTGACCCGGTGAGCCTCGACATGCCGGTGGGCACCGACGAGGAGGCGCCGCTCGGCGACTTCATCGAGGACACCGAGTCGGTCTCCGCCGAGTCGGAGGTCGTGGCCGGTTTCATGCATCGCGACATTGACCGGGTGCTAGGCACGTTGGACGAGCGGGAACGCGACGTGGTGCGCATGCGCTACGGGCTGCTCGACGGCCGCCCGCGGACTCTCGACGAGATCGGCCGTGCGTTCGGGATCTCCCGCGAGCGCGTCCGCCAGATCGAGCGCGATTCGATGGCGAAGCTGCGTTCCGACGATCGCTCCGAGGTGCTCCGGGAGTACGCGAGCTAG
PROTEIN sequence
Length: 340
MAASQTLATPLAARDPESAHTTAWAAARDIEDLDAQGPAADLVRVYLNGIGRTQLLTAEQEVKLAKRIEAGVFAQHKLETEKRISPTRRADLKAIVRDGNRARSHLLVANLRLVVSLAKRYTGRGMPLLDLIQEGNLGLIRAVEKFDYTKGFKFSTYATWWIRQAVSRGMADQARTIRLPVHLVEQVNKLSRLKRELHQQLGRDATLDELAEESGIPSDKIADLLDHARDPVSLDMPVGTDEEAPLGDFIEDTESVSAESEVVAGFMHRDIDRVLGTLDERERDVVRMRYGLLDGRPRTLDEIGRAFGISRERVRQIERDSMAKLRSDDRSEVLREYAS*