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SCNpilot_cont_500_bf_scaffold_2460_curated_2

Organism: scnpilot_dereplicated_Alphaproteobacteria_7

partial RP 26 / 55 BSCG 24 / 51 ASCG 3 / 38
Location: comp(802..2538)

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0HJR0_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 84.8
  • Coverage: 579.0
  • Bit_score: 994
  • Evalue 3.80e-287
Type VI secretion protein {ECO:0000313|EMBL:EQA99589.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium quisquiliarum P25.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.8
  • Coverage: 579.0
  • Bit_score: 994
  • Evalue 5.40e-287
virD2; type IV secretory pathway VirD2 component similarity KEGG
DB: KEGG
  • Identity: 81.0
  • Coverage: 584.0
  • Bit_score: 954
  • Evalue 1.40e-275

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Taxonomy

Sphingobium quisquiliarum → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1737
ATGGCCGATGAGCACGAGTTTCGGGTTCGTCCGGGCCGCGTCCGCTCGTCCGGCGCCCAGCGCGCCAGGCCCTTCATCGCGCAGGCACTGGCGGCGGCGAAGAAGGCCGGTGGCGTGTCGCGTTCAGGCCGCATCATCGCAGGCAACCGCTCCCGCTTCGGGCAGGGCCAGCGCGCCAGCATCCAGGCGAACCGCCTGATCACGTCGCGCTCGCGTGGCGCTGTCATCAAGGCCCGCGTCGTCCGCCATTCCGCGCGCACCGCGTCGCTCAGTACCCATCTCACCTATCTGCGCCGCGAAGGCGTCACCCGGGATGGGGAGAAGGCCCGCCTGTTCGGGCCGGAGACGGAGACTGCCGATGCCGGTGCCTTCGCCGGACGGTGTGAAGAGGATCGGCATCATTTCCGCTTCATCATCTCGCCCGACGATGCGCTGGAGATGGCCGACCTCAAAGCCTTCACCCGCGATCTTGTCGGCCAGATGCAAAAGGACCTCGGCACCAGGCTCGACTGGGTCGCCGTCGATCATTGGAATACCGAGCATCCGCATATTCATCTGATTGTTCGCGGCGTGCGGGACGACGGCCAGGACCTCGTCATCGCCCGCGACTACATCAAGGAGGGCATGCGCGACCGGGCCCGTGATCTCATCACGCAGGAACTGGGGCCGCGCACCGACCTCGACATCCGCCGCACCATCGAACGTCAAATCGACGCCGAACGCTGGACCCAGCTCGACCGCCAACTCCTGCGCGACGTCCGCGACACCGGCGTGATCGATCTCGCCCCGCGTGTCGATCGGCAGCCCGACGAATTCCATTCCCTGAAGGTAGGCCGTTTGCGGAAGTTGGAAACGCTTGGTCTTGCCGATCCGATCGGCCCTGGCCAATGGGTGATCGACGACAAGGCTGAGGCGGTCCTGCGCGCGTTGGGCGAGCGTGGTGACATCATCAAACGGATGCACCGGGCGCTGACCGAACACGGCATCGAGCGCGGCTCGGCAAGCTATGTACTTGCTGGCGAACAGCTCGATACCCCGATCATCGGCCGGCTGGTGACACGCGGGCTGGACGACGAGCTGAGCGGCACCGCCTATGCCGTGGTCGATGGCGTCGATGGCCGCACACATCACATCCGGCTGCCCGACCTCGATGCCGCCGGTGACAGCGCGCCCGGTTCGATCGTCGAGTTGCGCAAGTTCGAAGACGCCAAGGGCCAGCGCCGTGTCGCCCTCGCCATTCGCTCCGATCTCGGTCTTGACGCCCAGGTCAGCGCGTCCGGGGCAACCTGGCTCGATCGCCAGACCATCGCTCGCGAGCCGCTCGCCCTCTGCGACGGCGGCTTCGGCGCCGAGGTCAGTCGGGCGATGTCGGCCCGCGCCGAGCATCTGGTCGAGCAAGGTCTCGCCGAACGGCAAGGGCAGCGCGTCAGCTTCGCCAGCAACTTGATCGGCACGTTGCGTCGCCGCGAACTGGATGCCGTCGGTGAGACGCTCGCCGCCGAGACTGGCCAGCCGTTCAACCGCGCCTGCAGTGGCGACTATGTCGCCGGCACCTATCGCCAGCGCCTAACGCTCGCCTCTGGTCGCTTCGCCATGCTGGACGACGGCATGGGCTTCCAGCTCGTGCCGTGGACGCCCTCGCTGGAAAAACAGCTCGGCCGCCACGTGTCGGGCGTCGCCCGCAATGACGGCGGCATCGACTGGAGTTTTGGCCGCAAGCGCGGCCTCGGCCTCTAA
PROTEIN sequence
Length: 579
MADEHEFRVRPGRVRSSGAQRARPFIAQALAAAKKAGGVSRSGRIIAGNRSRFGQGQRASIQANRLITSRSRGAVIKARVVRHSARTASLSTHLTYLRREGVTRDGEKARLFGPETETADAGAFAGRCEEDRHHFRFIISPDDALEMADLKAFTRDLVGQMQKDLGTRLDWVAVDHWNTEHPHIHLIVRGVRDDGQDLVIARDYIKEGMRDRARDLITQELGPRTDLDIRRTIERQIDAERWTQLDRQLLRDVRDTGVIDLAPRVDRQPDEFHSLKVGRLRKLETLGLADPIGPGQWVIDDKAEAVLRALGERGDIIKRMHRALTEHGIERGSASYVLAGEQLDTPIIGRLVTRGLDDELSGTAYAVVDGVDGRTHHIRLPDLDAAGDSAPGSIVELRKFEDAKGQRRVALAIRSDLGLDAQVSASGATWLDRQTIAREPLALCDGGFGAEVSRAMSARAEHLVEQGLAERQGQRVSFASNLIGTLRRRELDAVGETLAAETGQPFNRACSGDYVAGTYRQRLTLASGRFAMLDDGMGFQLVPWTPSLEKQLGRHVSGVARNDGGIDWSFGRKRGLGL*