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scnpilot_cont_500_p_scaffold_62

Search features with annotation key words

Displaying items 121-147 of 147 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_62_121
unknown

Not on your lists

comp(125689..125868)
DNA (180bp) protein (60aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_62_122
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

126018..127781
DNA (1764bp) protein (588aa)
Blue-light-activated histidine kinase 1 {ECO:0000313|EMBL:AKH42625.1}; EC=2.7.13.3 {ECO:0000313|EMBL:AKH42625.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadale
signal transduction histidine kinase (EC:2.7.3.-)
Signal transduction histidine kinase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GB38_NOVAD rbh
scnpilot_cont_500_p_scaffold_62_123
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(127772..128536)
DNA (765bp) protein (255aa)
Two-component response regulator n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PCX3_9SPHN
Putative transcriptional regulatory protein pdtaR {ECO:0000313|EMBL:AKH42591.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythr
two-component response regulator
scnpilot_cont_500_p_scaffold_62_124
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(128832..129983)
DNA (1152bp) protein (384aa)
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B307EE rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO54272.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
scnpilot_cont_500_p_scaffold_62_125
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(130113..130997)
DNA (885bp) protein (295aa)
fatty acid hydroxylase n=1 Tax=Sphingopyxis baekryungensis RepID=UPI0003B319CF rbh
Fatty acid hydroxylase {ECO:0000313|EMBL:AHE55236.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sa
fatty acid hydroxylase
scnpilot_cont_500_p_scaffold_62_126

Not on your lists

comp(131178..132272)
DNA (1095bp) protein (365aa)
Putative permease n=1 Tax=uncultured bacterium RepID=A3RGX0_9BACT rbh
Putative permease {ECO:0000313|EMBL:ABN71555.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
lipopolysaccharide export system permease
scnpilot_cont_500_p_scaffold_62_127

Not on your lists

comp(132269..133498)
DNA (1230bp) protein (410aa)
Putative permease n=1 Tax=uncultured bacterium RepID=A3RGX1_9BACT rbh
Putative permease {ECO:0000313|EMBL:ABN71556.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
permease YjgP/YjgQ
scnpilot_cont_500_p_scaffold_62_128
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(133696..134064)
DNA (369bp) protein (123aa)
ATP-dependent Clp protease adaptor protein ClpS n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GB27_NOVAD
ATP-dependent Clp protease adapter protein ClpS {ECO:0000313|EMBL:AKH42597.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrob
ATP-dependent Clp protease adaptor protein ClpS
scnpilot_cont_500_p_scaffold_62_129
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(134345..135301)
DNA (957bp) protein (319aa)
Phasin n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZCA0_9SPHN
Phasin {ECO:0000313|EMBL:EGD57693.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifige
phasin
scnpilot_cont_500_p_scaffold_62_130

Not on your lists

comp(135613..137622)
DNA (2010bp) protein (670aa)
polyhydroxyalkanoate synthase (EC:2.3.1.-)
Polyhydroxyalkanoate synthase n=1 Tax=uncultured bacterium RepID=A3RGX4_9BACT rbh
Polyhydroxyalkanoate synthase {ECO:0000313|EMBL:ABN71559.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
scnpilot_cont_500_p_scaffold_62_131
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

137904..139106
DNA (1203bp) protein (401aa)
aminotransferase (EC:2.6.1.-)
Aminotransferase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZC97_9SPHN rbh
Aminotransferase {ECO:0000313|EMBL:EGD57695.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nit
scnpilot_cont_500_p_scaffold_62_132
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

139383..140021
DNA (639bp) protein (213aa)
Two component response regulator KdpE n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IJZ9_9SPHN
two component response regulator KdpE
Two component response regulator KdpE {ECO:0000313|EMBL:CCA91817.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source
scnpilot_cont_500_p_scaffold_62_133
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(140280..140690)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G9I6_NOVAD
Isopropylmalate/homocitrate/citramalate synthases {ECO:0000313|EMBL:GAO56358.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingob
hypothetical protein
scnpilot_cont_500_p_scaffold_62_134
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(140693..140902)
DNA (210bp) protein (70aa)
Formate dehydrogenase, delta subunit n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z7A3_9SPHN
Formate dehydrogenase, delta subunit {ECO:0000313|EMBL:EGD59521.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source=
formate dehydrogenase, delta subunit
scnpilot_cont_500_p_scaffold_62_135
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(140899..143733)
DNA (2835bp) protein (945aa)
Formate dehydrogenase, alpha subunit n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z7A2_9SPHN rbh
Formate dehydrogenase, alpha subunit {ECO:0000313|EMBL:EGD59520.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source=
NAD-dependent formate dehydrogenase subunit alpha
scnpilot_cont_500_p_scaffold_62_136
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(143723..144256)
DNA (534bp) protein (178aa)
Molybdenum cofactor guanylyltransferase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GAE2_NOVAD
Molybdenum cofactor guanylyltransferase {ECO:0000313|EMBL:KHS46110.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sourc
molybdenum cofactor guanylyltransferase
scnpilot_cont_500_p_scaffold_62_137
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(144253..145761)
DNA (1509bp) protein (503aa)
NADH dehydrogenase (Quinone) n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z7A0_9SPHN rbh
NADH dehydrogenase (Quinone) {ECO:0000313|EMBL:EGD59518.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosph
NAD-dependent formate dehydrogenase subunit beta
scnpilot_cont_500_p_scaffold_62_138
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(145761..146183)
DNA (423bp) protein (141aa)
NADH dehydrogenase (Ubiquinone), 24 kDa subunit n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z799_9SPHN
NADH dehydrogenase (Ubiquinone), 24 kDa subunit {ECO:0000313|EMBL:EGD59517.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium
NAD-dependent formate dehydrogenase subunit gamma
scnpilot_cont_500_p_scaffold_62_139
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(146183..146566)
DNA (384bp) protein (128aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IP17_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK65656.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingo
scnpilot_cont_500_p_scaffold_62_140
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(146580..147692)
DNA (1113bp) protein (371aa)
S-(hydroxymethyl)glutathione dehydrogenase {ECO:0000256|RuleBase:RU362016}; EC=1.1.1.284 {ECO:0000256|RuleBase:RU362016};; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingom
Alcohol dehydrogenase class III/S-(Hydroxymethyl)glutathione dehydrogenase n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V5H9_SPHWW rbh
S-(hydroxymethyl)glutathione dehydrogenase
scnpilot_cont_500_p_scaffold_62_141
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

148621..150366
DNA (1746bp) protein (582aa)
sulfatase; K01130 arylsulfatase [EC:3.1.6.1] Tax=RBG_16_Planctomycetes_55_9_curated
arylsulfatase n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B57EB5 rbh
sulfatase
scnpilot_cont_500_p_scaffold_62_142
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(150514..152259)
DNA (1746bp) protein (582aa)
hypothetical protein n=1 Tax=Novosphingobium nitrogenifigens RepID=UPI0002E6EBBB rbh
TPR repeat-containing protein {ECO:0000313|EMBL:EGD59576.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosp
hypothetical protein
scnpilot_cont_500_p_scaffold_62_143
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

152643..155489
DNA (2847bp) protein (949aa)
hypothetical protein n=1 Tax=Sphingomonas elodea RepID=UPI00026302E9 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP71060.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
scnpilot_cont_500_p_scaffold_62_144
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

155524..157209
DNA (1686bp) protein (562aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9CAW4_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EIZ80585.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
scnpilot_cont_500_p_scaffold_62_145
unknown

Not on your lists

157638..158396
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0003706960
scnpilot_cont_500_p_scaffold_62_146
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(158922..159524)
DNA (603bp) protein (201aa)
TetR-family transcriptional regulator n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z7R4_SPHJU
Regulatory protein TetR {ECO:0000313|EMBL:KEQ52063.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlor
TetR-family transcriptional regulator
scnpilot_cont_500_p_scaffold_62_147
Sphingobium sp. ba1, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

159681..159815
DNA (135bp) protein (45aa)
electron transfer flavoprotein subunit beta n=1 Tax=Sphingobium xenophagum RepID=UPI00036889A5
Electron transfer flavoprotein beta subunit {ECO:0000313|EMBL:KFL47039.1}; TaxID=1522072 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" sou
electron transfer flavoprotein subunit beta
Displaying items 121-147 of 147 in total

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