ggKbase home page

scnpilot_cont_500_p_scaffold_13_42

Organism: SCNPILOT_CONT_500_P_Novosphingobium_63_111

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(42606..43976)

Top 3 Functional Annotations

Value Algorithm Source
Transporter n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VFP7_SPHWW similarity UNIREF
DB: UNIREF100
  • Identity: 59.3
  • Coverage: 454.0
  • Bit_score: 519
  • Evalue 3.70e-144
  • rbh
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigene similarity UNIPROT
DB: UniProtKB
  • Identity: 65.6
  • Coverage: 450.0
  • Bit_score: 605
  • Evalue 7.20e-170
sodium:neurotransmitter symporter similarity KEGG
DB: KEGG
  • Identity: 59.3
  • Coverage: 454.0
  • Bit_score: 519
  • Evalue 1.00e-144

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas sanxanigenens → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1371
ATGAGCAGCCAAAATAACAAGGACCTGTGGACCTCCAACCTTGGATTCGTGCTGGCAACGGCCGCGGCGGCCATCGGGCTGGGCAGCCTCTGGCGCTTTCCCTATGTGGCCGGGGCCAATGGCGGCGGAGCCTTTGTACTGGTCTATATGCTGTTCATCGCGGCGCTCTGCGTGCCTTTGATGATCGCCGAAATGAGCCTTGGCAAAGCGGGCATGGGCAGCGTGGTCGGATCGGTCCGTCGGCTGGTGGCCGAAGAGAACGCCTCGCCCTTCTGGCGCGTGGTAGGCTGGCTCAGCCTTGCCGTCCCCTTCTTTGGTCTGAGCTATTACAGCGTGGTGGCTGGCTGGTCGCTCGATTACACGCGCGTGGCCGTCGCGCAGGGTTTTGCCGGGACCGATGCCGGGGCCTCGCGCCACCTGTTCGAAACGCTGATCGGATCGCCATGGCGACAGGGGGCGATGCAGTTCACCTTCATCATGGGCACAGCCACGGTGGTCGCCCTTGGCGTTCAGCGCGGGATCGAGATCGTGTCGCGCATCAAGATGGTGGCGATGTTCACCGTTCTGATCGGGCTGGTGCTGTATAATGCAATCACGGTGGGTCTGGGGCCTGCGGTCGATTTCCTGATCGCGCCCGATTTTGCCCGCCTGACGCCCGCCAGCCTGCTGACCGCGATGGGGCAGGCGCTGTTTTCCACCGCCATCGGCGCGGGCGTGCTGATGACCTATGCCGCCTATCTGCCCGCTGGCGTTTCGGTGCCCAAATCGGCGGGCGTGGTGGCCGGATCGGTGGTGGCCGTGTCGCTGCTGGCGGGTCTGGCGATCTTTCCTATCGTGCTGGCCCATGGGCTTACCCCTGCCGAGGGGCCGAACCTGATCTTCGTCACGCTGCCGGTTGCCTTTGGCGCGATGCCGGGCGGGCAATTCATCGCCGCGCTGTTCTTTGGCCTGATTACGCTGGGGGCTTTTACCACGGCGGTGGGCATGCTCGAACCGGTCGCGGCCTATTGGCTGGAGCGCAAGCAATGGCCGCGCCCGCTGGTGGCCTATGGCACGGGTCTGGCGATCTGGATGGTGGGCCTGCCCTCGCTGCTGTCTTTCAGCACGCTTAAAGATGTCCATCCCCTCGCCTTCATCCCCGGCTTTGGCGGCAAGACTTTCTTCGATGCGCTCGACCATGGGATCAGCGAGTTTCTCCTGCCGATCAACGCGCTGCTGATCGCGCTCTTTGCCGGATACGCGCTGCGCCGCCGCCTCAGCGCGTCCGAAACCACCCTCCCCCCGGCGCTGCACAAAGTGTGGCGGCTGTTCACCGCGGTCATCGTGCCGCTGTCCATTCTGGTGCTGATGATCTCGCAGCTCAGCCGCTGA
PROTEIN sequence
Length: 457
MSSQNNKDLWTSNLGFVLATAAAAIGLGSLWRFPYVAGANGGGAFVLVYMLFIAALCVPLMIAEMSLGKAGMGSVVGSVRRLVAEENASPFWRVVGWLSLAVPFFGLSYYSVVAGWSLDYTRVAVAQGFAGTDAGASRHLFETLIGSPWRQGAMQFTFIMGTATVVALGVQRGIEIVSRIKMVAMFTVLIGLVLYNAITVGLGPAVDFLIAPDFARLTPASLLTAMGQALFSTAIGAGVLMTYAAYLPAGVSVPKSAGVVAGSVVAVSLLAGLAIFPIVLAHGLTPAEGPNLIFVTLPVAFGAMPGGQFIAALFFGLITLGAFTTAVGMLEPVAAYWLERKQWPRPLVAYGTGLAIWMVGLPSLLSFSTLKDVHPLAFIPGFGGKTFFDALDHGISEFLLPINALLIALFAGYALRRRLSASETTLPPALHKVWRLFTAVIVPLSILVLMISQLSR*