ggKbase home page

scnpilot_cont_500_p_scaffold_13_49

Organism: SCNPILOT_CONT_500_P_Novosphingobium_63_111

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 51000..52103

Top 3 Functional Annotations

Value Algorithm Source
RND family efflux transporter, MFP subunit n=1 Tax=Methylomicrobium album BG8 RepID=H8GH01_METAL similarity UNIREF
DB: UNIREF100
  • Identity: 33.8
  • Coverage: 364.0
  • Bit_score: 183
  • Evalue 3.90e-43
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49157.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.8
  • Coverage: 365.0
  • Bit_score: 237
  • Evalue 2.40e-59
RND transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 34.8
  • Coverage: 362.0
  • Bit_score: 177
  • Evalue 6.00e-42

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 1104
ATGACGATGACTTCATCCAAGGCTCTGTCGATGGCCATGGGCGCGGGCGTGCTGATCGCCGGGGGCCTGTGGTGGCATGGGCAAAGCGCGCCAGCGGCAACCAGCGCGCCTGCGGCGGCCTCGGCGCTGGATGCCGTCCATCCCGCCCGCGCCGATATTGCCGCCAGTTTTGAGGCCGACGCCAGCATCGAGCCATGGCAGAGCGCCGACCTCTTCGCCAAGGTTTCGGGCTATGTGGCCGATATGCGGGTCGATATTGGCGACAAGGTGACCGCCGGACAGGTGCTGGCCACGATCCGCCTGCCCGAGGTCGTGCATGAACTGGCCGAGGACCGCGCGACTTTGGCCGCGCGCCGGGCAGAATTGTCGCTGCAACAGATCACGCAGAAGCGGCAGGAGGAACTCTATCGCGCCAAGGGCATCACCGATCAGGCGATGGACGAGGCAAAAGCGCACACCAGCATCGCCCATGCGCAGGCCGATCTGGCCGCCGCCACGCTGGCCAAGGCGCAGGCGGTTTCGGCCTATACGCGGATTGTCGCGCCCTTTGCCGGGGTGGTGACGCGGCGCATGGTCAACAATGGCGCCTTCATTCAGGCGGCCACCAATGGCCTGTCCTCGCCTTTGTTCACGGTGCAGCAGGTTGACCGGTTGCGCGTGATGGTGGCCGTGCCCGCCGCGCAGGCCGCCGCAGTGCGCAAGGGGCAGAGCGCGACGCTGAGCACGGGGAGCGACGATCCGGTCAAGGCCAGTGTCACCCGCACCGCAGGCAGCCTGGATCAGGCCACGCGCACGATGATGGCCGAAATCGACATTCCGGGCGGGCGGCTGCTGGCGGGCGGTTTTACCCGCGCGCGGATTGAGACGGCGCGCCATACCGGCGTGCTGGGCCTGCCCAATGCGGCCATCGGCAAGGATGACAAGGGCAGTTTCGCGATGGCCGTCATCGGCGGCAAGGTCGCGCGCAGAGCGATCACCACCGGGATCACCGATGGCAAGCTGACCGAGATCACCGATGGGGTGGGCGCGGGCGATGTCATTCTGGCCAATGCCAAATCCGCGCCGCCGGTGGACAATGCCGTGACGGTCAAGGTGGCGCCATGA
PROTEIN sequence
Length: 368
MTMTSSKALSMAMGAGVLIAGGLWWHGQSAPAATSAPAAASALDAVHPARADIAASFEADASIEPWQSADLFAKVSGYVADMRVDIGDKVTAGQVLATIRLPEVVHELAEDRATLAARRAELSLQQITQKRQEELYRAKGITDQAMDEAKAHTSIAHAQADLAAATLAKAQAVSAYTRIVAPFAGVVTRRMVNNGAFIQAATNGLSSPLFTVQQVDRLRVMVAVPAAQAAAVRKGQSATLSTGSDDPVKASVTRTAGSLDQATRTMMAEIDIPGGRLLAGGFTRARIETARHTGVLGLPNAAIGKDDKGSFAMAVIGGKVARRAITTGITDGKLTEITDGVGAGDVILANAKSAPPVDNAVTVKVAP*