ggKbase home page

scnpilot_cont_500_p_scaffold_13_222

Organism: SCNPILOT_CONT_500_P_Novosphingobium_63_111

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 256111..256707

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WLN9_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 63.2
  • Coverage: 174.0
  • Bit_score: 210
  • Evalue 2.10e-51
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 59.5
  • Coverage: 190.0
  • Bit_score: 213
  • Evalue 4.10e-53
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=105219 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia manni similarity UNIPROT
DB: UniProtKB
  • Identity: 59.5
  • Coverage: 190.0
  • Bit_score: 213
  • Evalue 2.00e-52

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ralstonia mannitolilytica → Ralstonia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 597
GTGAATTCGGCCGATGCCGATTGCGTGTTGGCCTTGCGGGCGGTGGAGGGGGACCGGCGCGCCTATACCATTCTGATGACGCGCCATGGCGGATCGCTGGCGCAGGCGGCGCGCGCTTTTGGCATGCCCGAAACCGATGTCGATGATGTGGTGCAGGAAAGTTTTATCGCGGCATGGCGCAATCTGGCGCAATATGATCCGGCGCGGCCCTTTCGCGGTTGGCTGTTTCGCATTGCGATCAACAAGATGCGCGATATGCGCCGCCGCCGCCGGGTGCGCGCCTTTCTGTTCGGCGCGCAAAGGCTGGATGAGCGCCCCGACATGGCCGACGATGCGCCCGATCAGGAACGCCTTGCCATGGCCGCCAGTGAGCTTGCCCATATCCGCGCCCGGCTGGGCAGCCTTGAAGGCGGCCTTGGCGAGGCGCTGGTGCTGACCGCGATTGTCGGCATGAGCCAGCCCGAGGCCGCTCTGGCGCTGGGCATCAGCGTCAAGAGCATCGAGGGGCGGGTGGCGAGGGCGCGGATGAAGCTGGCCGGGCTACTCGATCAGGAAAAAATGCAGCAGGCCGAGGGGAAGGCAGCGCGCGGCGCGTAG
PROTEIN sequence
Length: 199
VNSADADCVLALRAVEGDRRAYTILMTRHGGSLAQAARAFGMPETDVDDVVQESFIAAWRNLAQYDPARPFRGWLFRIAINKMRDMRRRRRVRAFLFGAQRLDERPDMADDAPDQERLAMAASELAHIRARLGSLEGGLGEALVLTAIVGMSQPEAALALGISVKSIEGRVARARMKLAGLLDQEKMQQAEGKAARGA*