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scnpilot_cont_500_p_scaffold_13_246

Organism: SCNPILOT_CONT_500_P_Novosphingobium_63_111

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(280413..281297)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate 5-dehydrogenase n=1 Tax=Novosphingobium sp. AP12 RepID=J2GTF8_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 75.5
  • Coverage: 282.0
  • Bit_score: 419
  • Evalue 2.60e-114
  • rbh
Shikimate 5-dehydrogenase {ECO:0000313|EMBL:EJL33665.1}; Flags: Precursor;; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.; similarity UNIPROT
DB: UniProtKB
  • Identity: 75.5
  • Coverage: 282.0
  • Bit_score: 419
  • Evalue 3.60e-114
shikimate dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 74.3
  • Coverage: 276.0
  • Bit_score: 413
  • Evalue 5.20e-113

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Taxonomy

Novosphingobium sp. AP12 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 885
ATGCCCACCAAGCCCCCCATCGCCAAGCCCCCTATCGGACGCGACACACAGCTTTGCATGTCGCTCTCGGGCCGCCCCGGCAATGCCGGATCGCGGCTGCATAACCGGCTCTATGAGTTGCTGGGTCTGGATTATGTCTATAAATCCTTTTCCACCCGCGATCTGCCTGCGGCCATCGGCGGCATTCGCGCGCTGAACATTCGCGGCTGCGCGATCTCTATGCCGTTCAAGGAGGATGTCATTCCCCTGCTCGACACGATCGAGGCGTCTGCAGCGGCCATCGACAGCGTCAACACGATCGTTAATGACGATGGCGTTCTGAGCGGGCATAACACCGATTACACCGCCGTGCGCGATCTGGTGGCGGCGCGAGGCCTCGACCGGGCGATGCCCTTCCTGCTGCGCGGCAGTGGGGGCATGGCCAAGGCGGTGGTCGCCGCGCTGCGTGACAGCGGTTTTGCCCATGGCACGATCATCGCCCGCAATGCGCAGGCGGGGCAGGCTCTGGCCGCGCAATATGGCTATGAATGGCGAGCCGATTTGCCCGAGGTAGGCGCGGCGATGCTGGTCAATGTCACGCCGCTGGGCATGGAGGGCGCGGATGCTGAAGCACTCGCCTATCCGCTGGACTTTATCGCGGATTGCCAGGTCGCCTTTGACGTTGTGGCCCAGCCCGCCCGCACACCCTTTATCCGCGCCGCCGAGGCCGCAGGCAAAACAGTCATTTCCGGAGCGGAGGTAATCGTGCTTCAGGCGGTCGAGCAATTCGTGCTCTATACCGGCATCCGGCCCGATGCGGCGGCCATCGCCGATGCCGCCAGTTTTGCCCATGGGCCGCAGGTGGGCGCATTGATGAGCGCGATGGCGCAAGGAAAGGCACAATAA
PROTEIN sequence
Length: 295
MPTKPPIAKPPIGRDTQLCMSLSGRPGNAGSRLHNRLYELLGLDYVYKSFSTRDLPAAIGGIRALNIRGCAISMPFKEDVIPLLDTIEASAAAIDSVNTIVNDDGVLSGHNTDYTAVRDLVAARGLDRAMPFLLRGSGGMAKAVVAALRDSGFAHGTIIARNAQAGQALAAQYGYEWRADLPEVGAAMLVNVTPLGMEGADAEALAYPLDFIADCQVAFDVVAQPARTPFIRAAEAAGKTVISGAEVIVLQAVEQFVLYTGIRPDAAAIADAASFAHGPQVGALMSAMAQGKAQ*