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scnpilot_cont_500_p_scaffold_13_251

Organism: SCNPILOT_CONT_500_P_Novosphingobium_63_111

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 287678..288994

Top 3 Functional Annotations

Value Algorithm Source
RpfN protein, partial n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B4E0F6 similarity UNIREF
DB: UNIREF100
  • Identity: 75.5
  • Coverage: 412.0
  • Bit_score: 661
  • Evalue 4.40e-187
  • rbh
Scaffold1, whole genome shotgun sequence {ECO:0000313|EMBL:KIS34284.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 70.7
  • Coverage: 450.0
  • Bit_score: 654
  • Evalue 1.00e-184
carbohydrate-selective porin OprB similarity KEGG
DB: KEGG
  • Identity: 67.3
  • Coverage: 450.0
  • Bit_score: 602
  • Evalue 9.00e-170

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Taxonomy

Novosphingobium sp. P6W → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1317
ATGTATCGCAAAATGCTCAAGGGCGCCTGCACCGCAGGCGTCATCGCCCTCTCCTTGTCCAATGCCATGGCGCAGGAAGCGCCGGTCAAGCCCTTTCAACCGCTGGCCGATGAGGGGATCACCCTCTCGCTCAACTATACCGGCGAGGCGGCGGGCAATGTCAGCGGCGGGCTGCGCCGGGCGAGCGCGTATACCGGCCAGGTCTATATGGGCGCGGATGTCGATATGGACCGCATCGCCGGGATTGGCGGCGGCACCTTGCATTTCGCCGTCACCAACCGCCATGGCAAGAGCCTGTCGGGCATCGCCATCGGCAACAACACCTCGGTTCAGGAAGTGTGGGGCACGCAGAACACCCATCTGGCGATCCTGACATGGGAGCAGAAGCTGCTTAATGGCCGGTTGAATATCGAGGCGGGGCGCAGTCAGGCCAATATCCACTTCCTCAACTCGCCGCTCTACTGTAATTTTCAGACCAATTCGGCCTGCGGCAACCCGACTTTCGTTTTCAAAAACAGCAATTTCACCTATTTCCCCGCCTCAAGCTGGATGATCCATGCCCGCGCGAATTTTACCCCGCAATGGTTCCTGCATGTCGGGGCCTATGAGGTGAACCCCGACCGCAAACAGGCCGATGACAATGGCTTCAGCTTTTCCACGCGCAACGCCACCGGCGTGATCGTGCCGTGGGAGGCGGGCTATGCCGACGATGCGGGCAGGACGCGCCTGCCGGGGCATTACATCCTGGGCGGGTGGTTTGACCGGGGCGATTATGCCGACCCTTTGCGCGACGCCAGTGGCGGGATCGCGATCCTGACAGGGCAAAATGCGGCGACTTTGCATGGCCGCTCGGGCCTCTATTTCCGCTTTGACCAAATGCTGACAAGGCCCGATCCGGCGACAAAACGGGGGCTGACCCTGTTCGGCGTGGCCATGACCAATCTGTCGGGGCGGGTCGAGGAAAGCCATTACCTTGAGTTGGGCCTGTTGCAGACCGGCACCTTCAAGGGGCGCGACTCCGACACGCTGGGCTTTTTGATCAACGATCAGCAATTCAGCACCTTGGCGGTCGAGCGGATGCGCGCGGCGCGGATGGCCGGGGGTGGCGACGGCAACATCCATCGCCACCAATATATGATGGAGCTGGCCTATGGCGCGCAGGTAAATCCGGCCATACGGATTTCGCCCAATATTCAATATATTGTTCACCCGGACCAGACCGGCGCCCCGTTCCGCCCCCGCGACATCGGCAATGCTTTCGTTTTCGGACTGAAATTTACGGTCGATGCTCCCACCCTGATGGGAATGATGCGCTAG
PROTEIN sequence
Length: 439
MYRKMLKGACTAGVIALSLSNAMAQEAPVKPFQPLADEGITLSLNYTGEAAGNVSGGLRRASAYTGQVYMGADVDMDRIAGIGGGTLHFAVTNRHGKSLSGIAIGNNTSVQEVWGTQNTHLAILTWEQKLLNGRLNIEAGRSQANIHFLNSPLYCNFQTNSACGNPTFVFKNSNFTYFPASSWMIHARANFTPQWFLHVGAYEVNPDRKQADDNGFSFSTRNATGVIVPWEAGYADDAGRTRLPGHYILGGWFDRGDYADPLRDASGGIAILTGQNAATLHGRSGLYFRFDQMLTRPDPATKRGLTLFGVAMTNLSGRVEESHYLELGLLQTGTFKGRDSDTLGFLINDQQFSTLAVERMRAARMAGGGDGNIHRHQYMMELAYGAQVNPAIRISPNIQYIVHPDQTGAPFRPRDIGNAFVFGLKFTVDAPTLMGMMR*