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scnpilot_cont_500_p_scaffold_13_307

Organism: SCNPILOT_CONT_500_P_Novosphingobium_63_111

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(342126..343037)

Top 3 Functional Annotations

Value Algorithm Source
LysR substrate binding domain protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RMA5_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 59.8
  • Coverage: 291.0
  • Bit_score: 327
  • Evalue 1.40e-86
LysR substrate binding domain protein {ECO:0000313|EMBL:EFH11567.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Rose similarity UNIPROT
DB: UniProtKB
  • Identity: 59.8
  • Coverage: 291.0
  • Bit_score: 327
  • Evalue 1.90e-86
LysR family transcripitonal regulator similarity KEGG
DB: KEGG
  • Identity: 55.6
  • Coverage: 293.0
  • Bit_score: 321
  • Evalue 3.60e-85

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Taxonomy

Roseomonas cervicalis → Roseomonas → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 912
ATGAATGATATCAGACAGCTCGACTTCAATCTTCTCAAGGCTTTCGATGCGTTGCTGGTCGAACGCAGCGTCACCCGCGCGGCCCATCGGCTCAGCCTGACCCAGCCGGCGGTGAGCGGGATGCTGGGGCGGCTGCGCGTGGCGCTGGATGATCCGCTGTTCGTGCGCTCCAGCCATGGCATCGTGCCCACGCCGCGCGCGCTGGCATTGGCGCAGCCGTTGCGGCGGATGATGAGCGAGGTGGAATGCATGCTCACCCGCCCGCAATTCGATCCGGCGAGCAGCACGGCCAGTTTCTCCATCGCGGCCAATGATTATGCGCAACTGGCCGTGCTGGTGCCGTGGCTGGAAGGGCTGCGGCGCGAGGCGCCGGGCATCCGCATCGCCATTCATTCCCTCGATGATGCGCGGCTGATGGCGGGCTTTGAACAGGGGCAGGTCGATCTGGCTCTGGTCACGCCCGAGGCTGCGCTGCCTGATCTCCATGCCGTGCGGCTCTATGAGGAAACTTACTCGCTGGCCCTGCGCGAGGGGCATCCGGCGGCGGAACGCGACATCACGCTCGATGATTTCTGCGCGCTAGATCATGGGCTGGTGTCCCTGCGCGGCGAGGCGTTCATGGGCGTGGTGGACCGTGCGCTGGCCGCCAATGGGCGCGAGCGGCGCGTCAGTTTCTCGGCCAGTTGCTTTCTCGTGCTGGTGCAGGTTCTGGCGCGTTCCGATCTGGTGGCGACAGTGCCGACGCGCCTGCTCGATGGCGTGGCCGGACTGATACGGCGGCCGCTGCCGCTGGCGGTGCCGGGCTTTACCAAACTGGCCGTGTGGCATGAACGCAGCCACCGCGACCCGGCGCATCAATGGCTGCGCGCCAGCCTGATTGCCAGCGCACGGACCGACCATCACGAGGCATAG
PROTEIN sequence
Length: 304
MNDIRQLDFNLLKAFDALLVERSVTRAAHRLSLTQPAVSGMLGRLRVALDDPLFVRSSHGIVPTPRALALAQPLRRMMSEVECMLTRPQFDPASSTASFSIAANDYAQLAVLVPWLEGLRREAPGIRIAIHSLDDARLMAGFEQGQVDLALVTPEAALPDLHAVRLYEETYSLALREGHPAAERDITLDDFCALDHGLVSLRGEAFMGVVDRALAANGRERRVSFSASCFLVLVQVLARSDLVATVPTRLLDGVAGLIRRPLPLAVPGFTKLAVWHERSHRDPAHQWLRASLIASARTDHHEA*