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scnpilot_cont_500_p_scaffold_41_12

Organism: SCNPILOT_CONT_500_P_Novosphingobium_63_111

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(12876..13763)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IJ42_METNO similarity UNIREF
DB: UNIREF100
  • Identity: 53.8
  • Coverage: 292.0
  • Bit_score: 290
  • Evalue 1.80e-75
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 53.2
  • Coverage: 293.0
  • Bit_score: 290
  • Evalue 6.70e-76
LysR family transcriptional regulator {ECO:0000313|EMBL:AIQ89929.1}; TaxID=693986 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.2
  • Coverage: 293.0
  • Bit_score: 290
  • Evalue 3.30e-75

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Taxonomy

Methylobacterium oryzae → Methylobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 888
TTGTTTGAACTGATCCAGTTGCGCTGCTTTGTGGCCGTGGCCGAGGAGCTGCATTTTGGCCGCGCCGCGGGGCGCCTCAACATGACCCAGCCGCCGCTCTCGCGCCATATTCAGGTGCTGGAACGGGTGATGAAGGTGCCGCTGTTCTACCGTTCCAGCCGGACGGTGAAGCTGACGGCGGCGGGCTCGGCCTTTCTGGTCGAGGCGCGGCGTGTGGTGCAGCTGGCCGACAGCGCCGTGGCCACCGCGCGCGCGGCGGCCGAGGGACGGCATGGGCTGGTCAGCCTGGGCTTTACCGCCGCCTCGGGCTATTCCTTTCTGCCGCGCTTCATCGCCAATGTGCAGAAAATCCTGCCCGATGTGCGCTTTGTGCTGAAAGAAATGGTCAGCGACGAGCAGGTCGAGAGCCTGCTCTCGGGCCGGATCGATCTGGGCTTTCTGCGCCCGCCGGTGCGGCATCCCGCGATGGTCTCGCAGGAAGTGCTGCGCGAACGTTTCATCATCTGCTCTCCGGCCAGCGTGCCGGAGGAGGAACGCCCGCGCCGTCTGGCCAATTTCGACCGCCTGCCCTTCATCACCTATGCGCCGGATAAGGCTCGCTATTTCCACGATCTGCTGGCGGGCCTTTTCGCAGGCGCGCGGGCCGAACCCCGCTTTGTGCAATATCTGGCCCAGATCCACACCGCGCTGATGCTGGTGGGGGCCGGGCATGGCTATGCGCTGGTGCCGGAAAGCTCGCGGCGGCTGCACCCCGATGGCGTGGTCTTTTCCGAACTGGAGGATGGCGAGCCGATTGTCGAATTGCAGGCCACATGGCGGCGCGATGCGGATAATCCGGCACTGCTGGCGCTGATCCCGCGCTTGATGGAATTGTGCGGGTCCGATTAA
PROTEIN sequence
Length: 296
LFELIQLRCFVAVAEELHFGRAAGRLNMTQPPLSRHIQVLERVMKVPLFYRSSRTVKLTAAGSAFLVEARRVVQLADSAVATARAAAEGRHGLVSLGFTAASGYSFLPRFIANVQKILPDVRFVLKEMVSDEQVESLLSGRIDLGFLRPPVRHPAMVSQEVLRERFIICSPASVPEEERPRRLANFDRLPFITYAPDKARYFHDLLAGLFAGARAEPRFVQYLAQIHTALMLVGAGHGYALVPESSRRLHPDGVVFSELEDGEPIVELQATWRRDADNPALLALIPRLMELCGSD*