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scnpilot_cont_500_p_scaffold_813_11

Organism: SCNPILOT_CONT_500_P_Pseudonocardia_73_10

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(10212..10901)

Top 3 Functional Annotations

Value Algorithm Source
GntR domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CRI6_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 65.5
  • Coverage: 226.0
  • Bit_score: 287
  • Evalue 9.20e-75
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 65.0
  • Coverage: 226.0
  • Bit_score: 286
  • Evalue 7.50e-75
GntR domain protein {ECO:0000313|EMBL:AEA26194.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain similarity UNIPROT
DB: UniProtKB
  • Identity: 65.0
  • Coverage: 226.0
  • Bit_score: 286
  • Evalue 3.70e-74

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 690
GTGCGAACCCATGAGCGGGTCCTGGCCCGGATCGAGGCTGATCTCACCGCGGGCCGGCTGGCCCTCGGCGACCGGCTGCCGGGGGAGCGGGTGCTCGCCGAGCAGCTCGGGGTCTCGCGGCCGTCGGTGCGCGAGGCGGTGCGGGTGCTGGAGGTGATGGGGGTGGTCCGCACGGCCACCGGCTCGGGCCCGGACGCCGGCGCGGTCCTCATCGCCGACGCCGCCACCGGTCTCGGCGCCGCCCTGCGGCTGCACGTGGCCACGAGCGGCCTCCCCGTCCGTGACGTCGTGGAGCTGCGGCTGCTCGTGGAGGGCTGGGGGATGCGGATGGCCGCGGCGAGCGGCGACGCCGCCGCGCTCGACCGGGCCGCCGCCCTGCTCGACGCGATGGACGCCCCCGGCCTCGAGCCCGACCGGTTCCTCGAGCTGGACGCCGCGTTCCACGAGGCGCTGGTGGGCACGGCGGGGAACGTGCTGGTGACGGCCGTGATGACCGGAGTACGTGGGGCGGTGCTGGCCTACGTCCGCGCCGGCGCGCGCACCGTCGCGGACTGGGACGCGATGGCCGCTCGGCTGCGCACCGAGCACCGGGAGATCCTGGGGGCGGTGCAGGAGGGTCGGGCGGACGAGGCGGAACGGACGGTCCGCGCCCACATCGAGGGCTACTACCGCGATGCCGGCGTTCACTGA
PROTEIN sequence
Length: 230
VRTHERVLARIEADLTAGRLALGDRLPGERVLAEQLGVSRPSVREAVRVLEVMGVVRTATGSGPDAGAVLIADAATGLGAALRLHVATSGLPVRDVVELRLLVEGWGMRMAAASGDAAALDRAAALLDAMDAPGLEPDRFLELDAAFHEALVGTAGNVLVTAVMTGVRGAVLAYVRAGARTVADWDAMAARLRTEHREILGAVQEGRADEAERTVRAHIEGYYRDAGVH*