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scnpilot_cont_500_p_scaffold_1092_50

Organism: SCNPILOT_CONT_500_P_Pseudonocardia_73_10

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 42932..43213

Top 3 Functional Annotations

Value Algorithm Source
cupin n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDAFF similarity UNIREF
DB: UNIREF100
  • Identity: 58.4
  • Coverage: 77.0
  • Bit_score: 92
  • Evalue 3.00e-16
Cupin {ECO:0000313|EMBL:KJJ96149.1}; TaxID=1619948 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 21.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.7
  • Coverage: 68.0
  • Bit_score: 88
  • Evalue 4.60e-15
Transcriptional regulator, AraC family protein similarity KEGG
DB: KEGG
  • Identity: 61.8
  • Coverage: 68.0
  • Bit_score: 87
  • Evalue 2.70e-15

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Taxonomy

Pseudomonas sp. 21 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 282
GTGGGCGAGGCCCTGCACTTCCTGCGGATGAGCGGCACGTACTACACGCGTTCCGAGCTGACGGCGCCGTGGGGGATGGTAATCCCGGCGGTGCCCGGGGCCCTGTGGTTCCACGTCGTCACGGCGGGGGAGGGCGCGCTCGAGACCGCCCAGGGCGGCACGGTGCTGCGTGCGGGGGACCTCGTGCTGGTGCCCCACGGCGCCGCGATGTCACGCTCGGCGTTCTCGGCCCGGTTCACCGAGCTGGTGGGGGAGCCCGCCATGCAGTACGTGACGCGGTAG
PROTEIN sequence
Length: 94
VGEALHFLRMSGTYYTRSELTAPWGMVIPAVPGALWFHVVTAGEGALETAQGGTVLRAGDLVLVPHGAAMSRSAFSARFTELVGEPAMQYVTR*