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scnpilot_cont_500_p_scaffold_1900_19

Organism: SCNPILOT_CONT_500_P_Pseudonocardia_73_10

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(23394..24008)

Top 3 Functional Annotations

Value Algorithm Source
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13) similarity KEGG
DB: KEGG
  • Identity: 67.8
  • Coverage: 180.0
  • Bit_score: 257
  • Evalue 4.30e-66
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI000370EB50 similarity UNIREF
DB: UNIREF100
  • Identity: 72.2
  • Coverage: 176.0
  • Bit_score: 272
  • Evalue 2.70e-70
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:ETK34334.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. similarity UNIPROT
DB: UniProtKB
  • Identity: 68.9
  • Coverage: 177.0
  • Bit_score: 264
  • Evalue 1.80e-67

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Taxonomy

Microbispora sp. ATCC PTA-5024 → Microbispora → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 615
ATGGTCGATAACCCGGACATGGAAGCACGCACGATGTCGCTGGCCGGGGTCCTGGTGTTCCTCCCGCAGGCCCACCACGACGAGCGGGGCTTCTTCACCCGCACGTTCGACGCCGTGATCGCGCGCGAGCACGGGCTGCGCCCGGAGGAGTTCGTGCAGGACAGTCAGTCCCGGTCCCACCGCGGCACGGTCCGGGGGATGCACGGCCGCGGCGGGCGGGGCGAGTCGAAGCTGGTGCGCTGCGCCCGCGGTGCCGTCCACGACGTGCTGGTGGACGCGCGCCCGTCGTCTCCCACGTTCGGGCGGCAGATGAGCATCACGCTCGACGACGAGTCGTTCGCCCACCTGTTCGTGCCGCCGGGCGTCCTGCACGGTTTCCAGGCGCTCACCGATGAGGCCGACGTCTGCTACCGGATCGACCGTGAGCACGCCCCCGGCGAGGACCTGTCGGTGCGGTACGACGACCCCGACCTGGCCATCGCGTGGCCGCAGCCGGTCACCCTGGTGAGCGCGAGGGACCGGGCCGCGGGCTCCTGGGCCGGGCTCACGGAGGAGCTCCTCAGTGCAGGCGACGCCGCCCGCCGGCCTGGTCGGCCAGCATCCGCAGGCCGCTGA
PROTEIN sequence
Length: 205
MVDNPDMEARTMSLAGVLVFLPQAHHDERGFFTRTFDAVIAREHGLRPEEFVQDSQSRSHRGTVRGMHGRGGRGESKLVRCARGAVHDVLVDARPSSPTFGRQMSITLDDESFAHLFVPPGVLHGFQALTDEADVCYRIDREHAPGEDLSVRYDDPDLAIAWPQPVTLVSARDRAAGSWAGLTEELLSAGDAARRPGRPASAGR*