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scnpilot_cont_500_p_scaffold_1520_4

Organism: SCNPILOT_CONT_500_P_Pseudonocardia_73_10

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(2748..3491)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Amycolatopsis methanolica RepID=UPI00037D4917 similarity UNIREF
DB: UNIREF100
  • Identity: 73.7
  • Coverage: 232.0
  • Bit_score: 337
  • Evalue 1.10e-89
  • rbh
IclR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 74.4
  • Coverage: 246.0
  • Bit_score: 359
  • Evalue 7.50e-97
IclR family transcriptional regulator {ECO:0000313|EMBL:AIJ22835.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis meth similarity UNIPROT
DB: UniProtKB
  • Identity: 74.4
  • Coverage: 246.0
  • Bit_score: 359
  • Evalue 3.70e-96

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Taxonomy

Amycolatopsis methanolica → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 744
ATGGCGCGCTCCCCCTCCGGCGAGTCCGTGCTCGAGCGCGCGGTGCGGATCTTCGAGGCCTTCACGCCCGGGGAGACGGCGCTGCGCGTCGCGGACATCGCGCGGCGCGCCGGGCTGCCGCCGGCCACGGCATCACGCATGGTGGCGGAGCTGGTGGAGCACGGCCTGCTCGCCCGCGACGACGACCGGCGCGTCCGGGTCGGGGTGCGGATGTGGGAGCTGGCGCTACGTGCGTCACCCACGCTGAGCCTGCGCGACGCGGCCATGCCGTTCCTGGAGGACCTGCACGCCGTGGTCGGCCACCACGTGCAGCTCGGTGTCCTCGACGGCGACGAGGTGCTCTTCGTCGAGCGGCTCTCCGCCCCCGGCGCCGTCATCAACTACACGCGCATCGCCGGGCGGCTGCCGCTGCACGCGTCGTCGTCGGGACTGGTGCTGCTGGCCCACGGGCCCCGTGAGCTGCAGGAGAAGGTGCTGGCCGGGCCGCTGCCCGGCTACACCGCATACACGATCACGACCCCGGCGCGGCTGCGCGCGACACTCGCCGGCGTGCGGCGCGACGGCCACGCGTTCTGCCCCGGCCACATCCATCCCGACGCGCTGGGCGTCGCGGTTCCGGTGCGCGCGGGCGGCCGGGTGGTGGCCGCGGTGGCGGCGATCGTCCCCAACGACGCGGACGGCCGCGCGGTCGTCCCGGTGCTGGGGGCGACGGCCCGTGGGATCGGGCGGACGCTCATTCAATGA
PROTEIN sequence
Length: 248
MARSPSGESVLERAVRIFEAFTPGETALRVADIARRAGLPPATASRMVAELVEHGLLARDDDRRVRVGVRMWELALRASPTLSLRDAAMPFLEDLHAVVGHHVQLGVLDGDEVLFVERLSAPGAVINYTRIAGRLPLHASSSGLVLLAHGPRELQEKVLAGPLPGYTAYTITTPARLRATLAGVRRDGHAFCPGHIHPDALGVAVPVRAGGRVVAAVAAIVPNDADGRAVVPVLGATARGIGRTLIQ*