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scnpilot_cont_500_p_scaffold_1337_11

Organism: SCNPILOT_CONT_500_P_Pseudonocardia_73_10

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(11273..11668)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal silencing factor RsfS n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWX8_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 83.1
  • Coverage: 130.0
  • Bit_score: 222
  • Evalue 3.50e-55
iojap family protein similarity KEGG
DB: KEGG
  • Identity: 82.3
  • Coverage: 130.0
  • Bit_score: 220
  • Evalue 2.90e-55
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxa similarity UNIPROT
DB: UniProtKB
  • Identity: 82.3
  • Coverage: 130.0
  • Bit_score: 220
  • Evalue 1.40e-54

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 396
GTGACGGCCACCGATCAGGCCCTCGCGATGGCCCAGGTGGCGGTGGCCGCGGCGGCCGACAAGCTGGCACAGGACATCGTCGTACTCGACGTGTCCGAGCAGCTGGTGATCACCGACTGCTTCGTCATCGCGTCGGCGCCCAACGAGCGCCAGGTGCAGGCGATCGTCGACGAGGTCGAGGAGAAGCTGCGGCTGCACGGCGCCAAGCCGACCCGCCGCGAGGGCACGCGCGAGGGGCGCTGGGTGCTGCTCGACTTCGTCGACGTCGTCGTGCACGTGCAGCACACCGAGGAGCGCGGGTTCTACGGCCTGGACCGGTTGTGGAAGGACTGCCCGCACATCGACTTCCCCGAGATGCACCAGCCGGTGCACCCCGACGAGGACGGCGCCGGGTGA
PROTEIN sequence
Length: 132
VTATDQALAMAQVAVAAAADKLAQDIVVLDVSEQLVITDCFVIASAPNERQVQAIVDEVEEKLRLHGAKPTRREGTREGRWVLLDFVDVVVHVQHTEERGFYGLDRLWKDCPHIDFPEMHQPVHPDEDGAG*