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scnpilot_cont_500_p_scaffold_2524_11

Organism: SCNPILOT_CONT_500_P_Pseudonocardia_73_10

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(9648..10547)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043720};; tRNA pseudouridine(55) s similarity UNIPROT
DB: UniProtKB
  • Identity: 80.3
  • Coverage: 295.0
  • Bit_score: 451
  • Evalue 8.80e-124
tRNA pseudouridine synthase B n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D127_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 80.3
  • Coverage: 295.0
  • Bit_score: 451
  • Evalue 6.20e-124
  • rbh
tRNA pseudouridine synthase B similarity KEGG
DB: KEGG
  • Identity: 80.3
  • Coverage: 295.0
  • Bit_score: 451
  • Evalue 1.80e-124

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 900
GTGACCGAACCCCTTCCCGGCCTCGTGGTGATCGACAAGCCCATGGGCCTGACCTCCCACGACGTCGTCGGGCGGCTGCGCCGCATCCTGCACACCCGCAAGATCGGCCACGCGGGCACGCTGGACCCGATGGCCACCGGGGTGCTGGTCTGCGGCGTCGGGCGCGGCACGAAGCTCCTGGGCCACCTCGCGCTCGACACCAAGGCCTACACGGCCACGGTCCGGCTCGGGGCCGCCACGACCACCGACGACGCCGAGGGCGCGACGCTCACCGAGGCGGATGCGTCGGGTGTCACCGAGGACGCCGTGCGCGCCGGGATGGCCGCGCTGACCGGCGCGATCCAGCAGGTCCCCAGCTCGGTCAGCGCGATCAAGGTCGACGGGCAGCGCGCCTACGCGCGGGTGCGGGCGGGGGAGGACGTGGTGCTGGCGGCGCGGCCCGTCACCGTGTCGGCGTTCGACCTGCTGGCGCTGCGCCGGAAGGGCACCTTCCTCGACCTCGACGTGGACGTCGCCTGCACCTCCGGCACCTACGTGCGGGCGCTGGCCCGCGACCTCGGGGCGGGCCTGGGCGTCGGCGGGCACCTGACCGCACTGCGCCGCACCCGCGTCGGGCCGTTCACGCTGGAGCACGCGCGCACGCTGGAGCAGCTGGAGGCCGACCCCACGCTGTCGCTGCCGCTGGACGACGCGGTGGGCGTCGCGTTCCCGCGTCGTGACGTCGACGCGAAGCTCGCCACCGACCTGTCGCACGGCCGCCCGCTGCCCGTCGCGGGGATCGGGGGCGTCTACGGCGTGTTCGCGCCGGACGGCCGGGCGCTGGCCCTGGTGAGCGAGCGGGGCGACGGGGACGACCGCCGGGCCCGCCCGGTCGTGGTGCTGGCCCCGGCGGGTAGCTGA
PROTEIN sequence
Length: 300
VTEPLPGLVVIDKPMGLTSHDVVGRLRRILHTRKIGHAGTLDPMATGVLVCGVGRGTKLLGHLALDTKAYTATVRLGAATTTDDAEGATLTEADASGVTEDAVRAGMAALTGAIQQVPSSVSAIKVDGQRAYARVRAGEDVVLAARPVTVSAFDLLALRRKGTFLDLDVDVACTSGTYVRALARDLGAGLGVGGHLTALRRTRVGPFTLEHARTLEQLEADPTLSLPLDDAVGVAFPRRDVDAKLATDLSHGRPLPVAGIGGVYGVFAPDGRALALVSERGDGDDRRARPVVVLAPAGS*