ggKbase home page

scnpilot_cont_500_p_scaffold_172

Search features with annotation key words

Displaying items 121-150 of 199 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_172_121
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(129526..130659)
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CYZ1_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR79150.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_172_122
unknown

Not on your lists

comp(130851..131111)
DNA (261bp) protein (87aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_172_123
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(131188..131412)
DNA (225bp) protein (75aa)
Uncharacterized protein {ECO:0000313|EMBL:CDX36692.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
scnpilot_cont_500_p_scaffold_172_124
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(131517..131726)
DNA (210bp) protein (70aa)
cold-shock protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000380A540
Cold-shock protein {ECO:0000313|EMBL:EZQ16639.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis
cold-shock DNA-binding protein family protein
scnpilot_cont_500_p_scaffold_172_125
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

132113..132361
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EQP5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV06418.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium met
Protein of unknown function (DUF982)
scnpilot_cont_500_p_scaffold_172_126
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(132508..133260)
DNA (753bp) protein (251aa)
UPI0003CE8F54 related cluster n=1 Tax=unknown RepID=UPI0003CE8F54 rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR81243.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_172_127
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

133700..133963
DNA (264bp) protein (88aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YC38_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHH10712.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhiz
hypothetical protein
scnpilot_cont_500_p_scaffold_172_128
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

133960..134331
DNA (372bp) protein (124aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YC39_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHH10713.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhiz
hypothetical protein
scnpilot_cont_500_p_scaffold_172_129
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

134435..134764
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036612DB
Uncharacterized protein {ECO:0000313|EMBL:KHJ53924.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensi
hypothetical protein
scnpilot_cont_500_p_scaffold_172_130
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

134761..135036
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9A4E5_RHIFH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCE98079.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" so
scnpilot_cont_500_p_scaffold_172_131
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(135099..136721)
DNA (1623bp) protein (541aa)
Putative ABC transporter, ATP-binding protein with duplicated ATPase domains {ECO:0000313|EMBL:CDX61733.1}; EC=3.6.3.- {ECO:0000313|EMBL:CDX61733.1};; TaxID=69974 species="Bacteria; Proteobacteria; Al
UPI0003CFB557 related cluster n=1 Tax=unknown RepID=UPI0003CFB557 rbh
ABC transporter
scnpilot_cont_500_p_scaffold_172_132
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

137095..137988
DNA (894bp) protein (298aa)
Periplasmic component of amino acid ABC-type transporter/signal transduction system n=1 Tax=Rhizobium leguminosarum bv. viciae WSM1455 RepID=J0B5V9_RHILV
Uncharacterized protein {ECO:0000313|EMBL:EWY40137.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella sti
ABC transporter substrate binding protein (amino acid)
scnpilot_cont_500_p_scaffold_172_133
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

137989..138873
DNA (885bp) protein (295aa)
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family n=1 Tax=Rhizobium leguminosarum bv. viciae WSM1455 RepID=J0JKU2_RHILV
ABC transporter permease {ECO:0000313|EMBL:KGM35405.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limo
amino acid ABC transporter permease
scnpilot_cont_500_p_scaffold_172_134
Streptomyces rapamycinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

138883..139668
DNA (786bp) protein (262aa)
ABC transporter n=1 Tax=Streptomyces rapamycinicus RepID=UPI000382FB98
ABC transporter
ABC transporter {ECO:0000313|EMBL:AGP51540.1}; TaxID=1343740 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rapamycinicus NRRL 5491.;"
scnpilot_cont_500_p_scaffold_172_135
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

139665..140789
DNA (1125bp) protein (375aa)
Pyoverdine/dityrosine biosynthesis protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YQZ5_9RHIZ
Pyoverdine/dityrosine biosynthesis protein {ECO:0000313|EMBL:EIM26387.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="M
pvcA; pyoverdine chromophore biosynthetic protein PvcA
scnpilot_cont_500_p_scaffold_172_136
GWF2_CPR3_35_18, CPR3, Bacteria

Not on your lists

140786..141646
DNA (861bp) protein (287aa)
Transcriptional regulator/sugar kinase id=4268645 bin=GWF2_CPR3_35_18 species=Microvirga sp. WSM3557 genus=Microvirga taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_CPR3_35_18 organism_group=CPR3
Transcriptional regulator/sugar kinase {ECO:0000313|EMBL:KKP69991.1}; TaxID=1618350 species="Bacteria; candidate division CPR3.;" source="candidate division CPR3 bacterium GW2011_GWF2_35_18.;"
ROK family protein
scnpilot_cont_500_p_scaffold_172_137
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

141668..142480
DNA (813bp) protein (271aa)
GntR domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F5G1_CONWI
GntR family transcriptional regulator
GntR domain protein {ECO:0000313|EMBL:ADB50628.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei
scnpilot_cont_500_p_scaffold_172_138
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

142632..143399
DNA (768bp) protein (256aa)
nagB; glucosamine-6-phosphate deaminase; K02564 glucosamine-6-phosphate deaminase [EC:3.5.99.6] Tax=CG_Anaero_02
Glucosamine-6-phosphate deaminase (EC:3.5.99.6)
Putative glucosamine-6-phosphate deaminase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y8V2_9FIRM
scnpilot_cont_500_p_scaffold_172_139
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

143650..143946
DNA (297bp) protein (99aa)
Mlr2037 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98J98_RHILO
hypothetical protein
Mlr2037 protein {ECO:0000313|EMBL:BAB49268.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAF
scnpilot_cont_500_p_scaffold_172_140
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

143991..144317
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI0003735626
Uncharacterized protein {ECO:0000313|EMBL:CDX19981.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium pluri
asr; acid shock protein
scnpilot_cont_500_p_scaffold_172_141
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(144426..145043)
DNA (618bp) protein (206aa)
UPI0003D06DBE related cluster n=1 Tax=unknown RepID=UPI0003D06DBE rbh
Transcriptional regulator {ECO:0000313|EMBL:ESZ22412.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium s
XRE family transcriptional regulator rbh
scnpilot_cont_500_p_scaffold_172_142
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

145266..146396
DNA (1131bp) protein (377aa)
UPI0003D06784 related cluster n=1 Tax=unknown RepID=UPI0003D06784 rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:ESZ22413.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobiu
hypothetical protein
scnpilot_cont_500_p_scaffold_172_143
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

146452..148059
DNA (1608bp) protein (536aa)
UPI0003CE560B related cluster n=1 Tax=unknown RepID=UPI0003CE560B rbh
family 5 extracellular solute-binding protein rbh
Peptide transporter {ECO:0000313|EMBL:ESY76934.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNH
scnpilot_cont_500_p_scaffold_172_144
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

148188..149285
DNA (1098bp) protein (366aa)
UPI0003CFFD72 related cluster n=1 Tax=unknown RepID=UPI0003CFFD72 rbh
beta-lactamase rbh
Beta-lactamase {ECO:0000313|EMBL:ESY90763.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A
scnpilot_cont_500_p_scaffold_172_145
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(149382..149951)
DNA (570bp) protein (190aa)
Cytochrome B561 n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KNK2_MESAW rbh
cytochrome B561
Cytochrome B561 {ECO:0000313|EMBL:AGB45579.1}; Flags: Precursor;; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhi
scnpilot_cont_500_p_scaffold_172_146
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

150139..150822
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00035C1EB0 rbh
Uncharacterized protein {ECO:0000313|EMBL:AID31219.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huak
conserved membrane hypothetical protein
scnpilot_cont_500_p_scaffold_172_147
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(150894..151607)
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00037C77DD rbh
Uncharacterized protein {ECO:0000313|EMBL:AID31223.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huak
hypothetical protein rbh
scnpilot_cont_500_p_scaffold_172_148
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

151731..152402
DNA (672bp) protein (224aa)
UPI0003D0622B related cluster n=1 Tax=unknown RepID=UPI0003D0622B rbh
Uncharacterized protein {ECO:0000313|EMBL:ESZ24794.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
scnpilot_cont_500_p_scaffold_172_149
Mesorhizobium sp. LSJC264A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(152445..154667)
DNA (2223bp) protein (741aa)
Diguanylate phosphodiesterase n=1 Tax=Mesorhizobium sp. LSJC264A00 RepID=V7F3D8_9RHIZ rbh
Diguanylate phosphodiesterase {ECO:0000313|EMBL:ESX24707.1}; TaxID=1287321 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobi
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
scnpilot_cont_500_p_scaffold_172_150
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(154678..155583)
DNA (906bp) protein (302aa)
PDZ/DHR/GLGF domain protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TAR8_MESCW rbh
PDZ/DHR/GLGF domain-containing protein
PDZ/DHR/GLGF domain protein {ECO:0000313|EMBL:ADV11948.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium
Displaying items 121-150 of 199 in total

View Taxonomy