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scnpilot_cont_500_p_scaffold_225

Search features with annotation key words

Displaying items 31-56 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_225_31
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

37286..38080
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036CCB22 rbh
potC; polyamine ABC transporter permease protein PotC; K11070 spermidine/putrescine transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
potC; polyamine transport protein PotC
scnpilot_cont_500_p_scaffold_225_32
Acetonema longum, Acetonema, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

38077..39168
DNA (1092bp) protein (364aa)
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000256|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000256|HAMAP-Rule:MF_01726};; TaxID=1009370 species="Bacteria; Firmicutes; Negativicutes; Sel
potG; spermidine/putrescine ABC transporter ATPase (EC:3.6.3.31)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036644EB rbh
scnpilot_cont_500_p_scaffold_225_33

Not on your lists

39165..40646
DNA (1482bp) protein (494aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036DB7C9 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGA17985.1}; TaxID=449393 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
amidohydrolase rbh
scnpilot_cont_500_p_scaffold_225_34
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40775..41866
DNA (1092bp) protein (364aa)
UPI0003CFA273 related cluster n=1 Tax=unknown RepID=UPI0003CFA273 rbh
Uncharacterized protein {ECO:0000313|EMBL:ESZ21821.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
scnpilot_cont_500_p_scaffold_225_35
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

41893..42822
DNA (930bp) protein (310aa)
Dehydrogenase n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FBU4_VERMA
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR66410.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micr
dehydrogenase
scnpilot_cont_500_p_scaffold_225_36
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42862..44520)
DNA (1659bp) protein (553aa)
Putative sulfatase n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6NA21_RHOPA rbh
sulfatase
Putative sulfatase {ECO:0000313|EMBL:CAE26808.1}; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palu
scnpilot_cont_500_p_scaffold_225_37
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44524..45297)
DNA (774bp) protein (258aa)
Putative ABC transporter membrane protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VAM9_9RHOB
Putative ABC transporter membrane protein {ECO:0000313|EMBL:EAQ14970.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" sourc
hypothetical protein
scnpilot_cont_500_p_scaffold_225_38
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45294..46082)
DNA (789bp) protein (263aa)
Putative taurine ABC transport system permease protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VAN0_9RHOB
Putative taurine ABC transport system permease protein {ECO:0000313|EMBL:EAQ14971.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimiba
putative ABC transporter, permease protein; putative aliphatic sulfonates transporter
scnpilot_cont_500_p_scaffold_225_39
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46091..46894)
DNA (804bp) protein (268aa)
ABC-type nitrate/sulfonate/taurine/bicarbonate transport systems, ATPase component-like protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VAN2_9RHOB
ABC-type nitrate/sulfonate/taurine/bicarbonate transport systems, ATPase component-like protein {ECO:0000313|EMBL:EAQ14973.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhod
ABC transporter
scnpilot_cont_500_p_scaffold_225_40
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46924..47910)
DNA (987bp) protein (329aa)
ABC taurine transporter, periplasmic ligand binding protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VAN1_9RHOB
ABC taurine transporter, periplasmic ligand binding protein {ECO:0000313|EMBL:EAQ14972.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Marit
nitrate/sulfonate/bicarbonate ABC transporter periplasmic component-like protein
scnpilot_cont_500_p_scaffold_225_41
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48000..48497
DNA (498bp) protein (166aa)
Transcriptional regulator, MarR family protein n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RC93_9RHIZ
Transcriptional regulator, MarR family protein {ECO:0000313|EMBL:ESR22999.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lut
transcriptional regulator, MarR family
scnpilot_cont_500_p_scaffold_225_42
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48613..48960)
DNA (348bp) protein (116aa)
Putative translation initiation inhibitor, yjgF family n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3HY86_9BRAD
Putative translation initiation inhibitor, yjgF family {ECO:0000313|EMBL:EJN09501.1}; Flags: Precursor;; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobi
hypothetical protein
scnpilot_cont_500_p_scaffold_225_43
Oceanicola granulosus, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49012..50133)
DNA (1122bp) protein (374aa)
Threonine synthase {ECO:0000313|EMBL:EAR51292.1}; EC=4.2.3.1 {ECO:0000313|EMBL:EAR51292.1};; TaxID=314256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oce
Threonine synthase n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CF35_9RHOB
threonine synthase
scnpilot_cont_500_p_scaffold_225_44
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(50135..50866)
DNA (732bp) protein (244aa)
ABC transporter related protein n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y3M9_THEBD
ABC transporter {ECO:0000313|EMBL:ETK34285.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
ABC transporter-like protein
scnpilot_cont_500_p_scaffold_225_45
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(50887..51540)
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Paenibacillus ginsengihumi RepID=UPI00037320E7
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region {ECO:0000313|EMBL:ENZ32473.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" sourc
polar amino acid ABC transporter inner membrane subunit
scnpilot_cont_500_p_scaffold_225_46
Dickeya dadantii, Dickeya, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51544..52209)
DNA (666bp) protein (222aa)
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Dickeya dadantii (strain Ech586) RepID=D2C0V8_DICD5
polar amino acid ABC transporter permease
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ACZ77029.1}; TaxID=590409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Dick
scnpilot_cont_500_p_scaffold_225_47
Streptomyces sp. PRh5, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(52269..53087)
DNA (819bp) protein (273aa)
Amino acid ABC transporter, periplasmic amino acid-binding protein n=1 Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9WMZ9_9ACTO
GlnH {ECO:0000313|EMBL:EXU61987.1}; TaxID=1158056 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PRh5.;"
family 3 extracellular solute-binding protein
scnpilot_cont_500_p_scaffold_225_48
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53220..54005
DNA (786bp) protein (262aa)
Transcriptional regulator n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P114_AZOS1
IclR family transcriptional regulator {ECO:0000313|EMBL:KJR64243.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="A
transcriptional regulator
scnpilot_cont_500_p_scaffold_225_49
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54508..55260
DNA (753bp) protein (251aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YL38_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CDX37869.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium pluri
hypothetical protein rbh
scnpilot_cont_500_p_scaffold_225_50
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55380..56777)
DNA (1398bp) protein (466aa)
NAD(P) transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000204};; Nicotinamide nucleotide transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}
NAD synthetase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00031D66D8 rbh
NAD/NADP transhydrogenase beta subunit rbh
scnpilot_cont_500_p_scaffold_225_51
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56779..57201)
DNA (423bp) protein (141aa)
NAD(P) transhydrogenase subunit alpha part 2 {ECO:0000313|EMBL:CDX26689.1}; EC=1.6.1.2 {ECO:0000313|EMBL:CDX26689.1};; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales
UPI0003D00EFE related cluster n=1 Tax=unknown RepID=UPI0003D00EFE
nicotinamide nucleotide transhydrogenase subunit alpha2
scnpilot_cont_500_p_scaffold_225_52
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57201..58388)
DNA (1188bp) protein (396aa)
UPI0003CF6593 related cluster n=1 Tax=unknown RepID=UPI0003CF6593 rbh
NAD(P) transhydrogenase subunit alpha {ECO:0000313|EMBL:ESY65157.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mes
NAD/NADP transhydrogenase alpha subunit
scnpilot_cont_500_p_scaffold_225_53
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58564..58788)
DNA (225bp) protein (75aa)
Aa3 type cytochrome c oxidase subunit IV n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EHE1_9RHIZ
Aa3 type cytochrome c oxidase subunit IV {ECO:0000313|EMBL:CCV03548.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="
aa3 type cytochrome c oxidase subunit IV
scnpilot_cont_500_p_scaffold_225_54
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58908..59057)
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8T9D2_MESCW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV09507.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium cice
scnpilot_cont_500_p_scaffold_225_55
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(59161..59874)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8T9D3_MESCW rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV09508.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium cice
scnpilot_cont_500_p_scaffold_225_56
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60086..60493)
DNA (408bp) protein (136aa)
Diguanylate cyclase/phosphodiesterase n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EV09_9RHIZ
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:CCV03551.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mes
diguanylate cyclase
Displaying items 31-56 of 56 in total

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