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scnpilot_cont_500_p_scaffold_579_43

Organism: SCNPILOT_CONT_500_P_Mesorhizobium_64_5.0

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 3 ASCG 12 / 38 MC: 2
Location: 47759..48385

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=2 Tax=Mesorhizobium RepID=V7H9R8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 91.3
  • Coverage: 208.0
  • Bit_score: 382
  • Evalue 3.20e-103
  • rbh
RNA polymerase sigma factor {ECO:0000313|EMBL:ESW94279.1}; TaxID=1287322 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium similarity UNIPROT
DB: UniProtKB
  • Identity: 91.3
  • Coverage: 208.0
  • Bit_score: 382
  • Evalue 4.50e-103
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 92.0
  • Coverage: 188.0
  • Bit_score: 351
  • Evalue 1.30e-94
  • rbh

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Taxonomy

Mesorhizobium sp. LSJC265A00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 627
ATGAACCTTTTTGGACCGATCGGCGACAAAGCGGACGAGAGCCAGGCGGCTCAACCGGCCATGAGCGCAGCGATCGACACCGATCGCGCGCTGGTGGAACGGGTCGCGAAGGGCGACCGGGCCGCCGTGCGGCTCCTGTTCATGCGTCACCACGCGCGGGTCTACCGCTTCGTGGCGCGCCAGACGGGATCGGAAATGATGGCCGACGACATCGCAAACGAGGTTTTCCTCGAATTGTGGAAGCAGGCGCCGAACTTCGAGGGCCGCTCGGAGGTGTCGACCTGGCTGCTCGGCATCGCCCGATTCAAGGCGCTGTCGATGCTGCGCAGGAAGAAGGAGGACTGGATCGACGACGAGGCCGCCGCCGCGGTGCCTGACAGCGCCGATACGCCTGAAGTCGCCACCATGAAGGAAGACAAGGGCGCCGCGCTCCGGCGCTGTGTCGACGCCCTGCCGGAAGAGCATCGCGTCGTCATCGACCTCGCCTATTACCACGGACAATCGGTGACCGAGATCGGCGAGGTGCTCGGCATCCCGGTGGCGACCGTCAAGACCAGGATGTTCTACGCCCGCAAGAAACTTGGCGAGGCCCTCAAGGCCGCCGGTTACGACAGGGGATGGCCATGA
PROTEIN sequence
Length: 209
MNLFGPIGDKADESQAAQPAMSAAIDTDRALVERVAKGDRAAVRLLFMRHHARVYRFVARQTGSEMMADDIANEVFLELWKQAPNFEGRSEVSTWLLGIARFKALSMLRRKKEDWIDDEAAAAVPDSADTPEVATMKEDKGAALRRCVDALPEEHRVVIDLAYYHGQSVTEIGEVLGIPVATVKTRMFYARKKLGEALKAAGYDRGWP*