ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

scnpilot_cont_500_p_scaffold_792_14

Organism: SCNPILOT_CONT_500_P_Mesorhizobium_64_5.0

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 3 ASCG 12 / 38 MC: 2
Location: comp(14968..15399)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CEF63F related cluster n=1 Tax=unknown RepID=UPI0003CEF63F similarity UNIREF
DB: UNIREF100
  • Identity: 87.8
  • Coverage: 139.0
  • Bit_score: 246
  • Evalue 1.90e-62
MarR family transcriptional regulator {ECO:0000313|EMBL:ESY75957.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mes similarity UNIPROT
DB: UniProtKB
  • Identity: 87.8
  • Coverage: 139.0
  • Bit_score: 246
  • Evalue 2.70e-62
MarR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 85.9
  • Coverage: 142.0
  • Bit_score: 242
  • Evalue 7.80e-62

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium sp. LNHC252B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 432
ATGACAGAGCCGCAGAGACAACGTCCCGCCATCAGCCAGGCCGAGTATCAGAGGCTTTCAGAGTTTCGTTATCTGATCCGACGCTTCCTGGAATTCAGCCAGACACAGGCCAATGGAGCGGGCCTCACCCCGCGCCAACATCAGGCGTTGCTGGCAATCAAGGGCTTTCCGGGCGGCGGCCCGGTGACGGTCGGCGACCTTGCCGAGCGCCTGCGCATCCGCCATCACAGCGCGGTGGAGCTTGTCGACCGGCTTTGCGAAGCCGGCCTCGTCGTCAGGGACCAGGACAAGCAGGATCATCGCCGCGTCCTCCTGCGGCTCACCGGATATGCCGAGGATTGCCTGGCGGACCTTTCCGCCGCGCATCTCGACGAACTGTCGCGCATCGAGCCGATGCTGCGGCGCCTGCTCTCCCGCAACAGCGGCGACTGA
PROTEIN sequence
Length: 144
MTEPQRQRPAISQAEYQRLSEFRYLIRRFLEFSQTQANGAGLTPRQHQALLAIKGFPGGGPVTVGDLAERLRIRHHSAVELVDRLCEAGLVVRDQDKQDHRRVLLRLTGYAEDCLADLSAAHLDELSRIEPMLRRLLSRNSGD*