ggKbase home page

scnpilot_cont_500_p_scaffold_852_22

Organism: SCNPILOT_CONT_500_P_Mesorhizobium_64_5.0

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 3 ASCG 12 / 38 MC: 2
Location: 18667..19914

Top 3 Functional Annotations

Value Algorithm Source
ECF family RNA polymerase sigma factor n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YHZ0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 83.2
  • Coverage: 410.0
  • Bit_score: 663
  • Evalue 1.10e-187
  • rbh
ECF family RNA polymerase sigma factor {ECO:0000313|EMBL:CDX13823.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Me similarity UNIPROT
DB: UniProtKB
  • Identity: 87.2
  • Coverage: 414.0
  • Bit_score: 700
  • Evalue 1.10e-198
putative RNA polymerase sigma factor containing a TPR repeat domain similarity KEGG
DB: KEGG
  • Identity: 81.9
  • Coverage: 414.0
  • Bit_score: 659
  • Evalue 5.90e-187
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium sp. ORS3324 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1248
ATGGACGATCGATCGGAGATCGCGCGGGCGGCGGCCGAAGCGGCCGCCCGTCGGAGCTATGGAAAGCTGGTCGCCTATCTCGCCGCCCGCACGCGCGACGTGGCGGGCGCCGAGGACGCGCTGGCCGAAGCCTTTGCCGCCGCGCTGGAGCGCTGGCCGCGCGACGGCGTGCCGGAGAGGCCGGAAGCCTGGCTGCTTGCCGTGGCGCGCCGGCGCGACGTCGACGCCGTCCGGCGGCGACTGACCGGCGAGGCCGCCCGCGATCATCTGCGGCTGATCGCCGAGGAGGCGGAGGCGCGCATGACCAATGAGGAACTGCCCGACGAGCGGCTGAGGTTGATGTTTGCCTGCGCCCATCCGGCGATCGAGCCCGGCGTGCGCGCGCCGCTGATGCTGCAGGCGGTGCTCGGCTTCGACGCCGCCACCATAGCCTCCGCCTTCCTGGTTTCGCCAACCGCGATGGGCCAACGGCTGGTGCGCGCCAAGAGCCGCATCCACGAGGCCGGCATCCCGTTCCGCGTGCCGGAGCGGGCGGAGCTCGGCGAGCGCCTCGACGCCGTTCTGGAAGCGATCTACGCGACCTTCGCCGAGGGATGGTCGGATCCGGCCGGAACCGAGACACGCCGGCGCAACCTCGCCACCGAAGGCATCTGGCTTGGCCGGCTGGTCGCCTCGCTGATACCGGAGGAGCCGGAGACGCTCGGCCTTCTGGCGCTGATGCTGTTCGCCGAAGCCCGGCGCGCCGCGCGTCGCGGCCACGACGGCGACTTCGTACCGCTCGACGAGCAGGATACCGCGCTCTGGGACGAGGCGCTGATCGAGGAGGCGGAAGGCCTGCTCCGGCGCGCCGCCGCCAAGGGCATCATCGGGCGCTACCAGCTGGAAGCCGCCGTGCAATCGGCGCACACCGCCAGGCGGCGCGGCGGCGCAACCGACTGGACCGCGATCCGCCAGCTCTACGATGCGCTGATGGCGATCGCCGCCTCGCCGGTGGTGGCGATCAACCGCGCCGTGGCGATCGCCGAGACGGAAGGAGCGATCGAGGGGCTCGCCGCGCTCGACGAGATTGGCAGCGACAGGCGGCTTGCCGGCTACCAGCCCTATTGGGCCGCCCGCGCCGAACTGGCGGCCAGGCTCGGCATGGCGGCGGAGGCCGCCGAGGCCTACGACCAGGCGATCGGCCTCGAGCGTGATCCGGCCTTGCGCCGCTTCCTGCTGGACAAGCGCGCGCGTGTCGCCCGCGCTTGA
PROTEIN sequence
Length: 416
MDDRSEIARAAAEAAARRSYGKLVAYLAARTRDVAGAEDALAEAFAAALERWPRDGVPERPEAWLLAVARRRDVDAVRRRLTGEAARDHLRLIAEEAEARMTNEELPDERLRLMFACAHPAIEPGVRAPLMLQAVLGFDAATIASAFLVSPTAMGQRLVRAKSRIHEAGIPFRVPERAELGERLDAVLEAIYATFAEGWSDPAGTETRRRNLATEGIWLGRLVASLIPEEPETLGLLALMLFAEARRAARRGHDGDFVPLDEQDTALWDEALIEEAEGLLRRAAAKGIIGRYQLEAAVQSAHTARRRGGATDWTAIRQLYDALMAIAASPVVAINRAVAIAETEGAIEGLAALDEIGSDRRLAGYQPYWAARAELAARLGMAAEAAEAYDQAIGLERDPALRRFLLDKRARVARA*