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scnpilot_cont_500_p_scaffold_6801_1

Organism: SCNPILOT_CONT_500_P_Mesorhizobium_64_5.0

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 3 ASCG 12 / 38 MC: 2
Location: 3..533

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretion system protein VirB10 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EN42_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 94.9
  • Coverage: 176.0
  • Bit_score: 332
  • Evalue 1.90e-88
Type IV secretion system protein VirB10 {ECO:0000313|EMBL:EYR82761.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. similarity UNIPROT
DB: UniProtKB
  • Identity: 94.9
  • Coverage: 176.0
  • Bit_score: 332
  • Evalue 2.70e-88
conjugation TrbI-like protein similarity KEGG
DB: KEGG
  • Identity: 54.1
  • Coverage: 159.0
  • Bit_score: 161
  • Evalue 2.10e-37

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 531
GTCATCCGCTCGGATGGCGTCTCCGTCGAGATCGCCTCCCCTGGCGCCGATCGCCTCGGCCGCGCCGGGCTCACCGGCGAGATCGACACGCATTTCTGGGAGCGGTTCGGTTCGGCCATCATGCTGTCGGTAATCGGCGGAGCTGCGGAATATGTCTCGGCGCTGGGCGATACCGCCACGGAAAGCGCTCGTTCAATCTCGACGGTCGATCCGCTCACCGGCGCGGTGACGACGGTCACCACGGAGCCGAGCCGCACGGCTGCTGAAGCCCGTTCGATCGCCGCCGAGAAATCGTCGGCCGTCCTCCAGGACATCGCCAACGAAGCCTTCAAGGAAAGCTCGAAGATTCCGCCGACGATCTATGTCGCGCAGGGCGAGTCGATCATCGTCTTCCTCAGGCGCGATCTCGACTTCTCCGCCTTCTATGCCGACCCGGTCCGGCAGGAGATGATGCGGCTCAAGCGCGGTGGCCAGATCCGGCGCAATGTCGACCCGACGCCCTACTATCCGATCGCGCCGGTCTACAAATGA
PROTEIN sequence
Length: 177
VIRSDGVSVEIASPGADRLGRAGLTGEIDTHFWERFGSAIMLSVIGGAAEYVSALGDTATESARSISTVDPLTGAVTTVTTEPSRTAAEARSIAAEKSSAVLQDIANEAFKESSKIPPTIYVAQGESIIVFLRRDLDFSAFYADPVRQEMMRLKRGGQIRRNVDPTPYYPIAPVYK*