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scnpilot_cont_500_p_scaffold_4

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Displaying items 151-180 of 516 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_4_151
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


155227..155748
DNA (522bp) protein (174aa)
30S ribosomal protein S5 n=2 Tax=Delftia acidovorans RepID=S2WF33_DELAC rbh
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.
rpsE; 30S ribosomal protein S5
scnpilot_cont_500_p_scaffold_4_152
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


155763..155945
DNA (183bp) protein (61aa)
50S ribosomal protein L30 n=4 Tax=Delftia RepID=RL30_DELAS
50S ribosomal protein L30
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.
scnpilot_cont_500_p_scaffold_4_153
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


155957..156388
DNA (432bp) protein (144aa)
50S ribosomal protein L15 n=3 Tax=Bacteria RepID=S2WVD7_DELAC
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia
rplO; 50S ribosomal protein L15
scnpilot_cont_500_p_scaffold_4_154
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


156413..157732
DNA (1320bp) protein (440aa)
Protein translocase subunit SecY n=4 Tax=Delftia RepID=A9BRX1_DELAS rbh
preprotein translocase subunit SecY
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae;
scnpilot_cont_500_p_scaffold_4_155
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

157865..157978
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=11 Tax=Comamonadaceae RepID=RL36_ACIET
50S ribosomal protein L36
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycl
scnpilot_cont_500_p_scaffold_4_156
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


158001..158366
DNA (366bp) protein (122aa)
30S ribosomal protein S13 n=4 Tax=Delftia RepID=RS13_DELAS
30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain
scnpilot_cont_500_p_scaffold_4_157
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


158385..158789
DNA (405bp) protein (135aa)
30S ribosomal protein S11 n=5 Tax=cellular organisms RepID=RS11_DELAS
30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans
scnpilot_cont_500_p_scaffold_4_158
Nematostella vectensis, Nematostella, Actiniaria, Hexacorallia, Cnidaria, Metazoa

Not on your lists


158880..159503
DNA (624bp) protein (208aa)
30S ribosomal protein S4 n=4 Tax=Delftia RepID=RS4_DELAS rbh
Predicted protein {ECO:0000313|EMBL:EDO25641.1}; Flags: Fragment;; TaxID=45351 species="Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella.;" source="Nematost
rpsD; 30S ribosomal protein S4
scnpilot_cont_500_p_scaffold_4_159
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

159616..160614
DNA (999bp) protein (333aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase
DNA-directed RNA polymerase subunit alpha n=4 Tax=Delftia RepID=RPOA_DELAS rbh
DNA-directed RNA polymerase subunit alpha
scnpilot_cont_500_p_scaffold_4_160
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


160801..161193
DNA (393bp) protein (131aa)
50S ribosomal protein L17 n=4 Tax=Bacteria RepID=RL17_DELAS
50S ribosomal protein L17
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia
scnpilot_cont_500_p_scaffold_4_161
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(161374..161691)
DNA (318bp) protein (106aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2WF41_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD36790.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
hypothetical protein
scnpilot_cont_500_p_scaffold_4_162
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

161986..163491
DNA (1506bp) protein (502aa)
DASS family divalent anion:Na+ symporter n=2 Tax=Delftia acidovorans RepID=S2WC14_DELAC rbh
DASS family divalent anion:Na+ symporter {ECO:0000313|EMBL:EPD36791.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia
anion transporter
scnpilot_cont_500_p_scaffold_4_163
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(163504..164091)
DNA (588bp) protein (196aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
Avi_7169 family alkylhydroperoxidase domain-containing protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WVE5_DELAC rbh
hypothetical protein
scnpilot_cont_500_p_scaffold_4_164
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(164088..164780)
DNA (693bp) protein (231aa)
Avi_7170 family CMD domain-containing protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WAN0_DELAC rbh
Avi_7170 family CMD domain-containing protein {ECO:0000313|EMBL:EPD36793.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Del
hypothetical protein
scnpilot_cont_500_p_scaffold_4_165
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(164777..165889)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XX89_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD44159.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
Luciferase-like, subgroup
scnpilot_cont_500_p_scaffold_4_166
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(165870..167561)
DNA (1692bp) protein (564aa)
nickel-transporting ATPase (EC:3.6.3.30 3.6.3.24)
Peptide/nickel transport system ATP-binding protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2W2G8_DELAC rbh
Peptide/nickel transport system ATP-binding protein {ECO:0000313|EMBL:EPD33968.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" sourc
scnpilot_cont_500_p_scaffold_4_167
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(167558..168514)
DNA (957bp) protein (319aa)
Binding-protein-dependent transport systems inner membrane component n=3 Tax=Delftia RepID=A9BS86_DELAS rbh
ABC transporter permease
Peptide/nickel transport system permease {ECO:0000313|EMBL:EPD44157.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia
scnpilot_cont_500_p_scaffold_4_168
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(168511..169458)
DNA (948bp) protein (316aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BS87_DELAS rbh
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABX33701.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae;
scnpilot_cont_500_p_scaffold_4_169
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(169487..171160)
DNA (1674bp) protein (558aa)
ABC transporter substrate binding protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2W6V7_DELAC rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KEH14755.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia
extracellular solute-binding protein
scnpilot_cont_500_p_scaffold_4_170
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

171412..171963
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2X1R3_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD33964.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
OsmC family protein
scnpilot_cont_500_p_scaffold_4_171
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

171989..172828
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WWL3_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD44153.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
hypothetical protein
scnpilot_cont_500_p_scaffold_4_172
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

173005..174201
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XG32_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD44152.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
molecular chaperone, HSP70 class
scnpilot_cont_500_p_scaffold_4_173
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(174369..175229)
DNA (861bp) protein (287aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule
16S rRNA (-2'-O)-methyltransferase n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2W452_DELAC rbh
uroporphyrin-III C/tetrapyrrole methyltransferase rbh
scnpilot_cont_500_p_scaffold_4_174
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

175310..175726
DNA (417bp) protein (139aa)
UPF0102 protein DelCs14_5459 n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6B176_DELSC
hypothetical protein
UPF0102 protein DelCs14_5459 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (str
scnpilot_cont_500_p_scaffold_4_175
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

175800..176408
DNA (609bp) protein (203aa)
D-sedoheptulose 7-phosphate isomerase n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XX76_DELAC rbh
Phosphoheptose isomerase {ECO:0000313|EMBL:KEH14759.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
phosphoheptose isomerase
scnpilot_cont_500_p_scaffold_4_176
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

176405..177136
DNA (732bp) protein (244aa)
transporter n=1 Tax=Chryseobacterium taeanense RepID=UPI0002DCD4A1 rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD33958.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
transport-associated protein
scnpilot_cont_500_p_scaffold_4_177
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(177336..178247)
DNA (912bp) protein (304aa)
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31)
3-hydroxyisobutyrate dehydrogenase n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WMP8_DELAC rbh
3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:EPD33957.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidov
scnpilot_cont_500_p_scaffold_4_178
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(178348..179484)
DNA (1137bp) protein (379aa)
Twitching motility protein PilU n=2 Tax=Delftia acidovorans RepID=S2W450_DELAC rbh
Twitching motility protein PilU {ECO:0000313|EMBL:EPD44146.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovora
twitching motility protein
scnpilot_cont_500_p_scaffold_4_179
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(179614..180246)
DNA (633bp) protein (211aa)
Crp/Fnr family transcriptional regulator n=1 Tax=Chryseobacterium taeanense RepID=UPI00030321BC rbh
Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:KEH14763.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia
putative Crp/Fnr family transcriptional regulator
scnpilot_cont_500_p_scaffold_4_180
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(180278..181321)
DNA (1044bp) protein (348aa)
Twitching mobility protein n=2 Tax=Delftia acidovorans RepID=S2X1Q1_DELAC rbh
Twitching mobility protein {ECO:0000313|EMBL:EPD44144.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CC
twitching motility protein
Displaying items 151-180 of 516 in total

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