ggKbase home page

scnpilot_cont_500_p_scaffold_64_58

Organism: SCNPILOT_CONT_500_P_Delftia_66_8.1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(55797..57269)

Top 3 Functional Annotations

Value Algorithm Source
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000256|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000256|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_0 similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 490.0
  • Bit_score: 997
  • Evalue 5.40e-288
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WFM0_DELAC similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 490.0
  • Bit_score: 997
  • Evalue 3.80e-288
  • rbh
23S rRNA (uracil-5-)-methyltransferase rumA similarity KEGG
DB: KEGG
  • Identity: 98.0
  • Coverage: 490.0
  • Bit_score: 983
  • Evalue 2.80e-284

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Delftia acidovorans → Delftia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1473
ATGAGTGAACCCCGCGACAACAAGATCCCCGACAACCTGCCCGAAGCCGACGACGACGCCCCTGCACTGCCCGAAGGCTGGCTGCAGGTGCTGTCCATGGATATGGACGCCCAGGGCGTGGCCCGCAAGAGCGATGGCAAGGTGGTATTCATCGACGGCGCACTGCCGACCGAGCTGGTCAGCGCCAATACCCATCGCAAGAAAAACAACTGGGAAGCCGCCAGCCTGACGGCCATCCACCGCGAATCCTCCCAGCGCGTGCGCCCCGGCTGCCCCAACTTCGGCTTGCATGCCGGCGCCTGCGGCGGCTGCAAGATGCAGCATCTGCACGTCGCTGCCCAGGTGGCCATCAAGCAGCGCGTGCTGGAGGACAACCTCTGGCATCTGGCCAAGGTCAGGCCCGAGACGCTGCTGCGCCCCATCGAAGGTCCGTCCTGGGGCTACCGCTTCCGCTCGCGCCTGTCGGTGCGCTACGTGGCCAAGAAGGGCAAGGTGCTGGTGGGCTTTCACGAGCGCAAGAGCCGCTACATCGCCGACATGGAGACCTGCAAGGTCCTGCCACCCCATGTGGATGCCATGCTGCTGCCCATGCGCGCGCTGATCGCCTCCATGGATGCGCGCGAAACCTGCCCGCAGATCGAGGTCGCCTGCGGCGACTCCGTCACGGCCCTGGTGCTGCGCCACCTGGAGCCGCTGTCCGAGGACGATCAGGCCCGGCTCCGCGCTTTCGCGGCCGAGCACAACGTGCAGTGGTGGCTTCAACCCAAGGGCCCGGACACCGTGCACCTTATGGAGCAGGGAGGCGCCCAGCTCGATTACGGCCTGCCTGATTTCGGCATCACCATGCCGTTCAAGCCCACGGACTTCACCCAGGTCAATCCGCACATCAACCGCGTGCTGGTCACGCGCGCGCTGCGCTTGCTGGATGTCAAGAAGGATGAGCGCGTGATCGACTGGTTCTGCGGTCTGGGCAACTTCACCCTGCCCCTGGCCACGCAGGCGCGCGAGGTGCTGGGCATCGAGGGCAGCGACACCCTGGTCAAGCGCTCCCATGAAAACTACGCGGCCAACAACGCGCAGCGGGCGGAAGGCGACAAGCTCGCGCCCACGCGCTTTGTGGCGCGCAACCTGTTCGAGATGACGCCCGAGATGCTGTTCGCCGACGGCGTCGCCGGCAAGTGGCTGGTCGATCCGCCGCGCGAAGGAGCGTTTGCGCTGTCCAAGGCCCTGGCCGACATCCACCAGGCGCGCATCGGCGCCGAAGGCGCCGAGCCCCTGCCGGCAGGGCATGAGGACTGGCGCTTTCCAGAGCGCATCGTTTATGTCAGCTGCAATCCCGCCACGCTGGCACGCGATGCCGGTTTGCTGGTGCACCTGGCCGGCTATCACTGTGTTTCGGCCGGCGTGGTCAACATGTTCCCGCACACGGCCCATGTGGAGAGCATGGCGGTGTTCGAGCGTCGCGTGGACTGA
PROTEIN sequence
Length: 491
MSEPRDNKIPDNLPEADDDAPALPEGWLQVLSMDMDAQGVARKSDGKVVFIDGALPTELVSANTHRKKNNWEAASLTAIHRESSQRVRPGCPNFGLHAGACGGCKMQHLHVAAQVAIKQRVLEDNLWHLAKVRPETLLRPIEGPSWGYRFRSRLSVRYVAKKGKVLVGFHERKSRYIADMETCKVLPPHVDAMLLPMRALIASMDARETCPQIEVACGDSVTALVLRHLEPLSEDDQARLRAFAAEHNVQWWLQPKGPDTVHLMEQGGAQLDYGLPDFGITMPFKPTDFTQVNPHINRVLVTRALRLLDVKKDERVIDWFCGLGNFTLPLATQAREVLGIEGSDTLVKRSHENYAANNAQRAEGDKLAPTRFVARNLFEMTPEMLFADGVAGKWLVDPPREGAFALSKALADIHQARIGAEGAEPLPAGHEDWRFPERIVYVSCNPATLARDAGLLVHLAGYHCVSAGVVNMFPHTAHVESMAVFERRVD*