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SCNPILOT_CONT_500_P_Chloroflexi-like_54_4

SCNPILOT_CONT_500_P_Bacteria_54_4
In projects: SCNPILOT_CONT_500_P  |  chloroflexi

Consensus taxonomy: Bacteria

Taxonomy override: Chloroflexi

Metagenomic Context

Parent: SCNpilot_cont_500_p_UNK

Properties

Avg. coverage: 4.43 Longest contig: 59.27 Kbp Bin length: 7.80 Mbp GC content: 53.64 %
Contigs count: 660 Features count: 6844 rRNAs count: 0 tRNAs count: 0

Genome completeness

near complete RP 47 / 55 MC: 2 BSCG 47 / 51 MC: 4 ASCG 9 / 38 MC: 1

Description

highly fragmented, from ESOM

Displaying items 151-200 of 660 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
scnpilot_cont_500_p_scaffold_4010
Domain: Bacteria (71.43%)
7 9246 bp 54.12 4.33 89.91
scnpilot_cont_500_p_scaffold_5915
Phylum: Chloroflexi (66.67%)
6 6594 bp 57.26 4.48 89.90
scnpilot_cont_500_p_scaffold_1492
Phylum: Chloroflexi (53.33%)
15 18654 bp 55.68 4.37 89.87
scnpilot_cont_500_p_scaffold_1628
Domain: Bacteria (85.71%)
14 17611 bp 54.12 4.51 89.86
scnpilot_cont_500_p_scaffold_9341
Phylum: Chloroflexi (55.56%)
9 4500 bp 55.56 4.20 89.80
scnpilot_cont_500_p_scaffold_4538
Phylum: Chloroflexi (60%)
5 8332 bp 57.21 4.73 89.80
scnpilot_cont_500_p_scaffold_3987
Domain: Bacteria (85.71%)
7 9280 bp 54.63 4.11 89.77
scnpilot_cont_500_p_scaffold_10112
Phylum: Chloroflexi (80%)
5 4783 bp 51.77 3.89 89.76
scnpilot_cont_500_p_scaffold_4409
Domain: Bacteria (66.67%)
9 8540 bp 54.17 4.09 89.75
scnpilot_cont_500_p_scaffold_4471
Phylum: Chloroflexi (71.43%)
7 8427 bp 54.61 4.38 89.75
scnpilot_cont_500_p_scaffold_7257
Species: Ktedonobacter racemifer (66.67%)
3 5486 bp 55.03 3.83 89.74
scnpilot_cont_500_p_scaffold_5967
Domain: Bacteria (75%)
8 6547 bp 54.27 4.79 89.72
scnpilot_cont_500_p_scaffold_4334 11 8654 bp 53.12 4.28 89.72
scnpilot_cont_500_p_scaffold_2671
Domain: Bacteria (84.62%)
13 18014 bp 56.32 4.23 89.71
scnpilot_cont_500_p_scaffold_4641
Species: Ktedonobacter racemifer (57.14%)
7 8148 bp 54.17 4.62 89.69
scnpilot_cont_500_p_scaffold_3742
Domain: Bacteria (72.73%)
11 9792 bp 54.94 4.79 89.68
scnpilot_cont_500_p_scaffold_2432
Domain: Bacteria (83.33%)
12 13524 bp 55.72 3.85 89.66
scnpilot_cont_500_p_scaffold_1429
Domain: Bacteria (80%)
20 19229 bp 54.38 4.04 89.66
scnpilot_cont_500_p_scaffold_2530
Domain: Bacteria (69.23%)
13 13166 bp 56.03 4.34 89.64
scnpilot_cont_500_p_scaffold_4918
Domain: Bacteria (85.71%)
7 7749 bp 55.84 4.14 89.62
scnpilot_cont_500_p_scaffold_3204
Phylum: Proteobacteria (52.94%)
17 16631 bp 53.98 5.11 89.62
scnpilot_cont_500_p_scaffold_1292
Domain: Bacteria (68.18%)
22 27590 bp 53.94 4.49 89.61
scnpilot_cont_500_p_scaffold_7126
Phylum: Chloroflexi (66.67%)
3 5576 bp 55.25 3.52 89.58
scnpilot_cont_500_p_scaffold_1925
Domain: Bacteria (76.47%)
17 20825 bp 51.39 4.99 89.52
scnpilot_cont_500_p_scaffold_4941
Phylum: Chloroflexi (50%)
14 13818 bp 53.20 4.64 89.47
scnpilot_cont_500_p_scaffold_6914
Domain: Bacteria (100%)
5 7624 bp 52.52 3.56 89.44
scnpilot_cont_500_p_scaffold_2304
Domain: Bacteria (87.5%)
16 19794 bp 56.67 4.53 89.44
scnpilot_cont_500_p_scaffold_5779
Phylum: Chloroflexi (50%)
14 6749 bp 56.38 4.36 89.35
scnpilot_cont_500_p_scaffold_4939
Domain: Bacteria (75%)
8 7716 bp 56.27 4.34 89.31
scnpilot_cont_500_p_scaffold_3720
Phylum: Chloroflexi (62.5%)
8 9833 bp 55.91 4.42 89.30
scnpilot_cont_500_p_scaffold_7943
Domain: Bacteria (66.67%)
6 5117 bp 52.43 3.55 89.29
scnpilot_cont_500_p_scaffold_10186
Domain: Bacteria (100%)
7 8514 bp 55.40 4.21 89.29
scnpilot_cont_500_p_scaffold_6785
Domain: Bacteria (85.71%)
7 5807 bp 54.42 4.26 89.27
scnpilot_cont_500_p_scaffold_7765
Domain: Bacteria (100%)
3 5206 bp 50.86 3.72 89.26
scnpilot_cont_500_p_scaffold_4201 14 9351 bp 55.33 5.89 89.25
scnpilot_cont_500_p_scaffold_5342
Domain: Bacteria (100%)
7 7200 bp 55.85 3.31 89.25
scnpilot_cont_500_p_scaffold_5635
Species: Ktedonobacter racemifer (50%)
4 6878 bp 55.66 3.88 89.24
scnpilot_cont_500_p_scaffold_1101
Domain: Bacteria (92%)
25 28952 bp 51.77 4.41 89.24
scnpilot_cont_500_p_scaffold_5082
Phylum: Chloroflexi (87.5%)
8 7535 bp 53.47 4.28 89.22
scnpilot_cont_500_p_scaffold_1546
Domain: Bacteria (81.48%)
27 29833 bp 53.62 4.40 89.22
scnpilot_cont_500_p_scaffold_2605
Domain: Bacteria (77.78%)
9 12883 bp 56.22 4.52 89.19
scnpilot_cont_500_p_scaffold_2088
Domain: Bacteria (84.62%)
13 15043 bp 56.42 3.70 89.18
scnpilot_cont_500_p_scaffold_5169
Domain: Bacteria (71.43%)
7 7424 bp 55.71 4.47 89.18
scnpilot_cont_500_p_scaffold_4914
Domain: Bacteria (100%)
7 7754 bp 53.53 4.49 89.14
scnpilot_cont_500_p_scaffold_4142
Domain: Bacteria (87.5%)
8 8950 bp 54.12 3.94 89.13
scnpilot_cont_500_p_scaffold_7488
Species: RBG_16_Nitrospirae_64_22_curated (50%)
4 5875 bp 56.05 4.95 89.11
scnpilot_cont_500_p_scaffold_4460
Phylum: Chloroflexi (50%)
10 10751 bp 53.33 4.69 89.10
scnpilot_cont_500_p_scaffold_1695
Domain: Bacteria (77.78%)
18 17152 bp 52.73 4.31 89.08
scnpilot_cont_500_p_scaffold_3768
Domain: Bacteria (100%)
9 9733 bp 56.35 4.78 89.05
scnpilot_cont_500_p_scaffold_3529
Domain: Bacteria (80%)
10 10275 bp 57.50 4.54 88.99
Displaying items 151-200 of 660 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.