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scnpilot_cont_500_p_scaffold_7490_4

Organism: SCNPILOT_CONT_500_P_Legionella_38_3_partial

partial RP 32 / 55 MC: 2 BSCG 33 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(1874..2350)

Top 3 Functional Annotations

Value Algorithm Source
Regulator of RpoD, Rsd/AlgQ n=1 Tax=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) RepID=A1S2J1_SHEAM similarity UNIREF
DB: UNIREF100
  • Identity: 36.5
  • Coverage: 137.0
  • Bit_score: 92
  • Evalue 5.10e-16
Regulator of sigma D similarity KEGG
DB: KEGG
  • Identity: 33.8
  • Coverage: 142.0
  • Bit_score: 92
  • Evalue 1.40e-16
Regulator of sigma D {ECO:0000313|EMBL:CBL47171.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.8
  • Coverage: 142.0
  • Bit_score: 92
  • Evalue 7.10e-16

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Taxonomy

gamma proteobacterium HdN1 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 477
ATGATGCACTCTACATTTTTATCATCGGTAAAAACTGCAGATAGGCTAGTGCAAAAATGGCTGCAAGGAAGTCAAAATTTAATGATCGCGTTAAATCACCTTTGCCATTTGAGGCCTTTTTATCCTGAAAATCAGCCCCTTGTATTAGAGTCCTTGCAAGAATTCTGCCAGACAATGGTAGATTATGTTTCCTTAGGACATTTTGTCGTCTATGAGCATATAGTCAATGTAATTGAGCTTTGCCAACCCTCACAAACCGATATTCCTAAAGATTTACTGAAGCAGCTCTTGCAATCAACGGCCGAGGCCTTAGATTTCAATGATAAATACCAAACAAATCCAGATTTAAAGACGCTTGATAAAGATCTTTCTTCTTTGGCTGAACATATTGCACAACGACTTGAATGGGAAGGATGGCTTCTTGAGATCTACCGTTCAGCAAAGGCGTGGCGTTATCTACCTGCAAAAACAGCTTAA
PROTEIN sequence
Length: 159
MMHSTFLSSVKTADRLVQKWLQGSQNLMIALNHLCHLRPFYPENQPLVLESLQEFCQTMVDYVSLGHFVVYEHIVNVIELCQPSQTDIPKDLLKQLLQSTAEALDFNDKYQTNPDLKTLDKDLSSLAEHIAQRLEWEGWLLEIYRSAKAWRYLPAKTA*