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scnpilot_cont_500_p_scaffold_880_curated

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_880_curated_1
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..676)
DNA (675bp) protein (225aa)
Formate dehydrogenase, beta subunit {ECO:0000313|EMBL:KFJ09533.1}; EC=1.2.1.2 {ECO:0000313|EMBL:KFJ09533.1};; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
Formate dehydrogenase, beta subunit n=4 Tax=Bacteria RepID=A9BWA5_DELAS
formate dehydrogenase subunit beta; K00124 formate dehydrogenase, beta subunit
scnpilot_cont_500_p_scaffold_880_curated_2
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(687..3113)
DNA (2427bp) protein (809aa)
formate dehydrogenase subunit alpha (EC:1.2.1.2); K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2]
Formate dehydrogenase, alpha subunit n=2 Tax=Delftia acidovorans RepID=S2X8E9_DELAC
Formate dehydrogenase, alpha subunit {ECO:0000313|EMBL:EPD41477.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
scnpilot_cont_500_p_scaffold_880_curated_3
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3162..3752)
DNA (591bp) protein (197aa)
molybdopterin oxidoreductase Fe4S4 region; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2]
Formate dehydrogenase, alpha subunit n=3 Tax=Bacteria RepID=S2WHA7_DELAC
Formate dehydrogenase, alpha subunit {ECO:0000313|EMBL:EPD41478.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
scnpilot_cont_500_p_scaffold_880_curated_4
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4108..5295)
DNA (1188bp) protein (396aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2X228_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD41479.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_880_curated_5
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(5362..8253)
DNA (2892bp) protein (964aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZ58_BREDI
Uncharacterized protein {ECO:0000313|EMBL:KIJ71744.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
scnpilot_cont_500_p_scaffold_880_curated_6
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8461..9723
DNA (1263bp) protein (421aa)
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; EC=2.3.1.61;; 2-oxoglutarate dehydrogenase complex component E2 {ECO:0000256|RuleBase:RU361138}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; K00658 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
2-oxoglutarate dehydrogenase E2 component (Dihydrolipoamide succinyltransferase) n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WLS2_DELAC
scnpilot_cont_500_p_scaffold_880_curated_7
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9814..11241
DNA (1428bp) protein (476aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
dihydrolipoamide dehydrogenase (EC:1.8.1.4); K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4]
Dihydrolipoyl dehydrogenase n=2 Tax=Delftia acidovorans RepID=S2X8F5_DELAC
scnpilot_cont_500_p_scaffold_880_curated_8
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11337..12440
DNA (1104bp) protein (368aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2WHA2_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD39113.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
AFG1 family ATPase; K06916
scnpilot_cont_500_p_scaffold_880_curated_9
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12481..13176
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2X222_DELAC
Uncharacterized protein {ECO:0000313|EMBL:KEH14347.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_880_curated_10
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13255..13947)
DNA (693bp) protein (231aa)
Uncharacterized protein n=3 Tax=Bacteria RepID=S2WII1_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD39111.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
protein serine/threonine phosphatase
scnpilot_cont_500_p_scaffold_880_curated_11
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14165..16288
DNA (2124bp) protein (708aa)
helicase c2; K03722 ATP-dependent DNA helicase DinG [EC:3.6.4.12]
ATP-dependent DNA helicase DinG n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WQ86_DELAC
ATP-dependent DNA helicase DinG {ECO:0000313|EMBL:EPD41486.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
scnpilot_cont_500_p_scaffold_880_curated_12
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16251..17042)
DNA (792bp) protein (264aa)
Outer membrane protein assembly factor BamD n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XHK0_DELAC
Outer membrane protein assembly factor BamD {ECO:0000256|HAMAP-Rule:MF_00922}; Flags: Precursor;; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
putative transmembrane protein; K05807 putative lipoprotein
scnpilot_cont_500_p_scaffold_880_curated_13
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17255..20788
DNA (3534bp) protein (1178aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
DNA polymerase III subunit alpha (EC:2.7.7.7); K02337 DNA polymerase III subunit alpha [EC:2.7.7.7]
DNA polymerase III subunit alpha n=1 Tax=Chryseobacterium taeanense RepID=UPI0002EACDD9
scnpilot_cont_500_p_scaffold_880_curated_14
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20922..21299
DNA (378bp) protein (126aa)
ATP-dependent Clp protease adapter protein ClpS n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2X215_DELAC
ATP-dependent Clp protease adapter protein ClpS {ECO:0000256|HAMAP-Rule:MF_00302}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
clpS; ATP-dependent Clp protease adaptor protein ClpS; K06891 ATP-dependent Clp protease adaptor protein ClpS
scnpilot_cont_500_p_scaffold_880_curated_15
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21363..23699
DNA (2337bp) protein (779aa)
ATP-dependent Clp protease ATP-binding subunit ClpA n=2 Tax=Delftia acidovorans RepID=S2WIH7_DELAC
ATP-dependent Clp protease ATP-binding subunit ClpA {ECO:0000313|EMBL:EPD39106.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
ATP-dependent Clp protease ATP-binding protein ClpA; K03694 ATP-dependent Clp protease ATP-binding subunit ClpA
scnpilot_cont_500_p_scaffold_880_curated_16
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23713..25236
DNA (1524bp) protein (508aa)
phospholipase D/transphosphatidylase; K06131 cardiolipin synthase [EC:2.7.8.-]
Cardiolipin synthase n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WQ93_DELAC
Cardiolipin synthetase {ECO:0000313|EMBL:KEH09323.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
scnpilot_cont_500_p_scaffold_880_curated_17
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25274..26713
DNA (1440bp) protein (480aa)
Exonuclease I {ECO:0000313|EMBL:KEH09324.1}; EC=3.1.11.1 {ECO:0000313|EMBL:KEH09324.1};; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
sbcB; exonuclease I (EC:3.1.11.1); K01141 exodeoxyribonuclease I [EC:3.1.11.1]
exonuclease I n=1 Tax=Chryseobacterium taeanense RepID=UPI00031F9C88
scnpilot_cont_500_p_scaffold_880_curated_18
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26857..28086)
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2XPR8_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD41494.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
nucleoside recognition domain-containing protein
scnpilot_cont_500_p_scaffold_880_curated_19
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28235..28630
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2X211_DELAC
Uncharacterized protein {ECO:0000313|EMBL:KEH14351.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
glyoxalase/bleomycin resistance protein/dioxygenase
scnpilot_cont_500_p_scaffold_880_curated_20
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28650..29477)
DNA (828bp) protein (276aa)
trans-aconitate 2-methyltransferase (EC:2.1.1.144); K00598 trans-aconitate 2-methyltransferase [EC:2.1.1.144]
Trans-aconitate 2-methyltransferase n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WQ99_DELAC
Trans-aconitate 2-methyltransferase {ECO:0000313|EMBL:EPD41496.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
scnpilot_cont_500_p_scaffold_880_curated_21
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29480..30439
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WLQ3_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD39100.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
LysR family transcriptional regulator
scnpilot_cont_500_p_scaffold_880_curated_22
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30449..31366)
DNA (918bp) protein (306aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2WP20_DELAC
LysR family transcriptional regulator {ECO:0000313|EMBL:KEH14353.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
LysR family transcriptional regulator
scnpilot_cont_500_p_scaffold_880_curated_23
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31442..32311
DNA (870bp) protein (290aa)
citryl-CoA lyase (EC:4.1.3.34); K01644 citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.6 4.1.3.34]
Citrate lyase subunit beta/citryl-CoA lyase n=2 Tax=Delftia acidovorans RepID=S2WH86_DELAC
Citrate lyase subunit beta/citryl-CoA lyase {ECO:0000313|EMBL:EPD39098.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
scnpilot_cont_500_p_scaffold_880_curated_24
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32393..33397
DNA (1005bp) protein (335aa)
Putative uncharacterized protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AV34_DELSC
Tripartite tricarboxylate transporter receptor family protein {ECO:0000313|EMBL:KFJ10489.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
hypothetical protein
scnpilot_cont_500_p_scaffold_880_curated_25
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33456..34619
DNA (1164bp) protein (388aa)
fomryl-CoA transferase (EC:2.8.3.16)
formyl-CoA transferase n=1 Tax=Chryseobacterium taeanense RepID=UPI000313D541
Uncharacterized protein {ECO:0000313|EMBL:EPD41501.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
scnpilot_cont_500_p_scaffold_880_curated_26
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34619..35464
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WLP7_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD39095.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
amidohydrolase 2; K07046
Displaying 26 items

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