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scnpilot_cont_500_p_scaffold_8186_curated_4

Organism: scnpilot_dereplicated_Delftia_1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(4109..4618)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AY72_DELSC similarity UNIREF
DB: UNIREF100
  • Identity: 98.8
  • Coverage: 169.0
  • Bit_score: 333
  • Evalue 1.10e-88
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 98.8
  • Coverage: 169.0
  • Bit_score: 333
  • Evalue 3.40e-89
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEF90489.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.8
  • Coverage: 169.0
  • Bit_score: 333
  • Evalue 1.50e-88

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Taxonomy

Delftia sp. Cs1-4 → Delftia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 510
ATGCCTGCCGCCGAAACCTCCCTTCACCGCGAAGTCGCCACGCTCTACACCGACCACCACGGCTGGCTGCAGGGCTGGCTGCGCAAGAAGCTGGGCGATGTGCACCAGGCGGCCGATCTGGCGCACGACACCTTTGTGCGCCTGCTGGCGCGCGACGAGCCTGTGCAGGCGCGTGAGCCGCGCGCCTTCCTGACCACGGTGGCGCAGCGCGTGCTGGCCAACCACTACCGGCGCCAGCAACTGGAGCGCGCGTATCTGGAGGCGCTGGCCCAGGCGCCGCAGTCCTTTGCCATCTCGCCCGAGGAGCGCGCGCTGCTGCTGGAGGCGCTGGACGAGATCGACCGCATGCTCGACGGCCTGCCCGCTCCCGTGCGGCGGGCCTTTCTGATGGCCCAGCTGGACGGCATGAAGCAGGCCGACATTGCGCGCGAGCTGGGCCTGTCGCTGACCACCATCAAGCGCTACCTGGTGCAGGCCGGCATGCACTGCTATTTCGCGGTGGGTGCATGA
PROTEIN sequence
Length: 170
MPAAETSLHREVATLYTDHHGWLQGWLRKKLGDVHQAADLAHDTFVRLLARDEPVQAREPRAFLTTVAQRVLANHYRRQQLERAYLEALAQAPQSFAISPEERALLLEALDEIDRMLDGLPAPVRRAFLMAQLDGMKQADIARELGLSLTTIKRYLVQAGMHCYFAVGA*