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scnpilot_cont_500_p_scaffold_36_curated_52

Organism: scnpilot_dereplicated_Leifsonia_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: comp(58183..58440)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 85.0
  • Bit_score: 170
  • Evalue 1.10e-39
DNA-directed RNA polymerase subunit omega n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RV61_LEIAQ similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 85.0
  • Bit_score: 170
  • Evalue 8.00e-40
DNA-directed RNA polymerase subunit omega similarity KEGG
DB: KEGG
  • Identity: 95.2
  • Coverage: 84.0
  • Bit_score: 162
  • Evalue 6.80e-38

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Taxonomy

Leifsonia aquatica → Leifsonia → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 258
ATGGCAACCAGCAACAACGGCATCATCGACCCGCCCATCGACGACCTGCTCGCCAAGGTCGAGTCGAAGTACGCCCTGGTGATCTTCGCGTCCAAGCGCGCCCGCCAGATCAACGACTACTACGCCGACCTCCACGAGGGCAGCCTGTTCGACAACGTCGGCCCGCTCGTCGACTCCTCGGTCGACGACAAGCCGCTGTCCGTCGCGATGCACGAGATCAACGAGGACAAGCTCGTCCTGAAGCCGATCGTCGAGTAA
PROTEIN sequence
Length: 86
MATSNNGIIDPPIDDLLAKVESKYALVIFASKRARQINDYYADLHEGSLFDNVGPLVDSSVDDKPLSVAMHEINEDKLVLKPIVE*