ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

SCNpilot_cont_750_bf_scaffold_1478_5

Organism: SCNpilot_cont_750_bf_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 15
Location: 7714..9177

Top 3 Functional Annotations

Value Algorithm Source
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X6S6_NAKMY similarity UNIREF
DB: UNIREF100
  • Identity: 76.0
  • Coverage: 367.0
  • Bit_score: 562
  • Evalue 3.10e-157
  • rbh
L-carnitine dehydratase/bile acid-inducible protein F similarity KEGG
DB: KEGG
  • Identity: 76.0
  • Coverage: 367.0
  • Bit_score: 562
  • Evalue 9.80e-158
  • rbh
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:ACV80824.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.0
  • Coverage: 367.0
  • Bit_score: 562
  • Evalue 4.40e-157

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nakamurella multipartita → Nakamurella → Nakamurellales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1464
GTGAGTGCAGGCCCGCTGTCCGATATCACCGTGCTGGACCTGACCCGGGCCCTGGCGGGGCCGCACGCCGCCATGATGCTCGGCGACCTCGGTGCCCGCGTGATCAAGATCGAGACGCCCGGCCGCGGGGACGACACCCGTGGCTGGGGGCCGCCGTTCGTCACCGCAGCGGAGCTTGCGGAGCGGCGCCGTGGTACAGCAGCGGAGCTTGCGGAGCGGCGTCGCGGTGCAGCCGCGGATGTGGCCGCGCGCCGAGCCGTCGCGGCAGCGGGCGCCGGCACGGAGGGGGCCGACGGGGTCACCGGGGCCGCCGGGGGTGCGGCCCGGAACAACGTCATAGGCGATTCTTCCGGCGATACGGAGGCCGCAGCTGCCGATCGCGCCCAGGGCGACGACAGGGGCAGCGACAGGGGCACCGGCACCAACGCGGACAGCGACACGAACACCGACCCGATCTCCACATACTTCCTGTCCTGCAACAGGAACAAGGAATCCGTCGCGCTGGACCTGAAGAGCGATCTCGGTGTCGCGGCTCTCACCGAGCTGGTGCGGCGGTCCGATGTGCTGCTGGAGAACTTCCGGCCCGGTGTGCTCGACCGGCTCGGCTTCCCCCTCGCGCGGCTCATGGAGCTGAACCCCGGCCTGGTGGTGCTCTCGATCTCCGGCTTCGGCCACGATGGGCCCGAGGGCGGCCGCGCCGGCTACGACCAGATCGCCCAGGGCGAAGGCGGTCTCATGTCGATGACGGGCCCCGACCCGGAGACCCCGACCAAGATGGGCGTGCCGATCTCCGACCTGCTCTCCGGCATGTACGGCGCGTTCGGCGTACTCGGCAAGCTGCACGAGCGGTCGATCACCGGGAAGGGCGGCCTGGTGCGCACCTCGCTGCTCGCCGCCGTCGTGGGCGTGCACGCCTACCAGGGCACCCGCTGGACCGTGGCCGGCGAAATCCCGAAAGCGCAAGGGCCGCACCATCCCTCGATCTGCCCCTACGGCCTGTTCCACGCGTCCGACGGCGCCGTGCAGATTTCCATCGGCTCGGAGGGCCTGTGGCAGAAGTTCGCCCCGGCGTTCGGCCTGCCCGTCGACGCGGACGGCTTCGCCACCAACGCGGACCGGGTGCGGAACGCCGCCGCCGTGCGGGCCGCCGTCGACGCCGCGTTCGCCGGATACACCTGCCGCGATCTGCTCGCCAAACTCGACGAGATCGGCGTGCCGTCCGGGCAGGTCAAGAACCTGCAGCAGGTCTACGAGTGGGAGCAAACGAGGTCGCAGGGCCTGCTGATCGACGTCGACCATCCGGTGCTCGGCACGGTCGAACTACCCGGTCCGCCACTGCGGTTCTTCGACGGCGACGGCTCCGAATGGCACCGCGATCATCTCGCCCCGCCGCTGCTCGGCCAGCACACCGCGGCCGTGCTCGATTGGTTGGGCGTCGCCGCGAACGAAGGTGACCGAGTATGA
PROTEIN sequence
Length: 488
VSAGPLSDITVLDLTRALAGPHAAMMLGDLGARVIKIETPGRGDDTRGWGPPFVTAAELAERRRGTAAELAERRRGAAADVAARRAVAAAGAGTEGADGVTGAAGGAARNNVIGDSSGDTEAAAADRAQGDDRGSDRGTGTNADSDTNTDPISTYFLSCNRNKESVALDLKSDLGVAALTELVRRSDVLLENFRPGVLDRLGFPLARLMELNPGLVVLSISGFGHDGPEGGRAGYDQIAQGEGGLMSMTGPDPETPTKMGVPISDLLSGMYGAFGVLGKLHERSITGKGGLVRTSLLAAVVGVHAYQGTRWTVAGEIPKAQGPHHPSICPYGLFHASDGAVQISIGSEGLWQKFAPAFGLPVDADGFATNADRVRNAAAVRAAVDAAFAGYTCRDLLAKLDEIGVPSGQVKNLQQVYEWEQTRSQGLLIDVDHPVLGTVELPGPPLRFFDGDGSEWHRDHLAPPLLGQHTAAVLDWLGVAANEGDRV*