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SCNpilot_cont_750_bf_scaffold_1852_26

Organism: SCNpilot_cont_750_bf_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 15
Location: comp(22187..24553)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein n=1 Tax=Afipia birgiae RepID=UPI0002F66C16 similarity UNIREF
DB: UNIREF100
  • Identity: 84.3
  • Coverage: 789.0
  • Bit_score: 1290
  • Evalue 0.0
Competence protein ComEA helix-hairpin-helix repeat region {ECO:0000313|EMBL:EKS42471.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.7
  • Coverage: 783.0
  • Bit_score: 1285
  • Evalue 0.0
RNA binding S1; K06959 uncharacterized protein similarity KEGG
DB: KEGG
  • Identity: 82.2
  • Coverage: 796.0
  • Bit_score: 1259
  • Evalue 0.0

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Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2367
GTGACGAATTCCATCTATCGCCGGATTGCGGACGAACTCAATGTTCGCGAACAGCAGGTTCAGGCCGCGGTTGAATTGCTCGACGGCGGCGCCACCGTGCCGTTCGTTGCGCGCTACCGCAAGGAAGCCACCGGCGCGCTCGACGACGCACAACTGCGCATGCTGGAAGAACGCCTGACCTACTTGCGCGAGATGGAAGAACGCCGCGCCGTCATCCTCAATTCGATCCGCGAGCAGGGCAAGCTCGACGACGCGCTGCAAGCGGCGATCATGGCCGCCGACAGCAAGGGCCGCCTCGAAGACATCTATCTGCCCTTCAAGCCGAAGCGTCGCACCAAGGCCGAGATCGCGCGCGAGGCCGGGCTTGGACCGTTAGCCGAACAGTTGCTGACGCAACCCGAGAACGATCCGCAGGTCGCCGCGACGCCGTTTATCAACGCCGAGAAACAGGTGGCCGATGCCGCTGCTGCGCTCGATGGCGCGCGCGCTATTCTGGTCGAGCGTTTCGCCGAAGATGCCGACCTGATCGGCGGTCTGCGCGAACAGCTCTGGGGCAACGGCGTGCTGACGTCGAAGATGCGCGACGGCAAGAAGGAAGCCGGCGCCAAGTTCAGCGACTACTTCGATTTCGGTGAGCCGCTGACGAAATTGCCGTCGCACCGCATCCTCGCGCTGTTTCGCGGCGAGAAGGAAGAGGTGCTGGACCTGCACATCGCGCCGGAAAACCCGGCGGCGGCCGCGCCGGCCGGCACCGCCGCGCCCAATCCTTACGAACTGCGCATCATGCATCGCTTCGCCATCGCGGATCGCGGCCGCCCCGGCGATCGCTGGCTGATCGATACCGTGCGCTGGGCCTGGCGCACCAAGATCCAGATTCATCTCAACATCGACATGCGGCTGAAACTGTGGACGGCGGCGGAAGACGAGGGCGTGCGCGTGTTTGCCTCCAACCTGCGCGACCTGCTGCTGGCCGCGCCCGCGGGCACCCGCGCGACGATGGGGCTCGATCCGGGTTACCGCACCGGCGTGAAAGTCGCGGTGGTGGATGCCACCGGCAAGGTGGTGGCGACGACTGCGATCTTCCCGCACGAGCCGCAGCGGCGATGGGATGAAGCGTTGGCCGTTCTCGGCAAGCTGGCGAAGGCGCACAACGTCGAACTGATCGCCATCGGCAACGGCACCGCCTCGCGCGAAACCGACAAGCTCGCCACCGAACTGGTGAAGCTGTTGCCCGACCTGAAGATGTCGAAGATCGTGGTGTCGGAAGCCGGCGCGTCGGTCTATTCGGCGTCGGCCTTCGCGTCCGAGGAATTGCCCGAGCTCGACGTCACGCTGCGCGGCGCGGTGTCGATCGCACGCCGGTTGCAGGATCCGCTGGCCGAACTGGTGAAGATCGATCCGAAGTCGATCGGCGTCGGACAATATCAGCACGACCTCGGCGAAGCAAAACTGTCACGCTCGCTCGACGCCGTGGTGGAAGACTGCGTCAACGCCGTCGGCGTCGATGCCAACACCGCCTCTGCACCGTTGCTTGCGCGCGTGTCCGGCATCGGTACGGGGCTGGCACAGAGCATCGTGCAGTATCGCGACGCCAACGGGCCGTTCAAATCGCGTAAGGCGTTGAAGGACGTGCCGCGTCTCGGTCCGAAGGCGTTCGAGCAATGTGCCGGCTTCCTGCGCATCGCGAATGGCGACGATCCGCTCGACGCGTCCGGCGTGCATCCGGAATCCTATCCGGTGGTGCGGCGAATTCTCGAAGCGACCAGGAGCGACATCAAGGCGATCATCGGTAATGCCGTGGCGCTGCGCCAGCTCAAGCCGCAGAGTTTCGTCGACGACACGTTCGGCTTGCCGACGGTGACCGACATTCTGCGCGAATTGGAAAAGCCCGGCCGCGATCCGCGTCCTGCCTTCAAGGCAGCGGAATTCAAGGAAGGCGTGGAGACCCTCAACGACCTCAAGCCGGGCATGATCCTCGAAGGTGCGGTCACCAACGTCGCCGCCTTCGGCGCGTTCGTCGATATCGGCGTGCATCAGGACGGGCTGGTGCACGTCTCTGCGATGTCGAAAAATTTCGTCAAGGATCCGCGCGAGGTGGTGAAGCCGGGCGATATCGTGCGGGTGAAAGTGCTGGACGTCGAAAAGCCGCGCAAGCGTATCGCGCTGACGCTGCGGCTCGACGACGAGATCGGCAAGCAGGATCGCGCCGGTGGGTCCGCCGGGCGAAGCGATGCGAGTACACGCGGGCAGGGGCCGCGACGCGATGCGCCACGCCGCGAGCAGCCGTCGTCATCGGGCGGCGGCGCGCTGGCCGATGCCTTGCGCCGCGCGGCGGAGAAGAACGCGGGCAACGGCAAGTCGCGGTGA
PROTEIN sequence
Length: 789
VTNSIYRRIADELNVREQQVQAAVELLDGGATVPFVARYRKEATGALDDAQLRMLEERLTYLREMEERRAVILNSIREQGKLDDALQAAIMAADSKGRLEDIYLPFKPKRRTKAEIAREAGLGPLAEQLLTQPENDPQVAATPFINAEKQVADAAAALDGARAILVERFAEDADLIGGLREQLWGNGVLTSKMRDGKKEAGAKFSDYFDFGEPLTKLPSHRILALFRGEKEEVLDLHIAPENPAAAAPAGTAAPNPYELRIMHRFAIADRGRPGDRWLIDTVRWAWRTKIQIHLNIDMRLKLWTAAEDEGVRVFASNLRDLLLAAPAGTRATMGLDPGYRTGVKVAVVDATGKVVATTAIFPHEPQRRWDEALAVLGKLAKAHNVELIAIGNGTASRETDKLATELVKLLPDLKMSKIVVSEAGASVYSASAFASEELPELDVTLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDLGEAKLSRSLDAVVEDCVNAVGVDANTASAPLLARVSGIGTGLAQSIVQYRDANGPFKSRKALKDVPRLGPKAFEQCAGFLRIANGDDPLDASGVHPESYPVVRRILEATRSDIKAIIGNAVALRQLKPQSFVDDTFGLPTVTDILRELEKPGRDPRPAFKAAEFKEGVETLNDLKPGMILEGAVTNVAAFGAFVDIGVHQDGLVHVSAMSKNFVKDPREVVKPGDIVRVKVLDVEKPRKRIALTLRLDDEIGKQDRAGGSAGRSDASTRGQGPRRDAPRREQPSSSGGGALADALRRAAEKNAGNGKSR*