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SCNPILOT_CONT_300_BF_Rhizobiales_59_19

SCNPILOT_CONT_750_BF_Rhizobium_60_16
In projects: SCNPILOT_CONT_750_BF

Consensus taxonomy: Rhizobium  →  Rhizobiales  →  Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 51-70 of 70 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_cont_750_bf_scaffold_922
Order: Rhizobiales (89.47%)
19 19020 bp 56.60 13.85 85.06
SCNpilot_cont_750_bf_scaffold_1050
Genus: Sinorhizobium (50%)
18 16127 bp 57.48 15.42 88.23
SCNpilot_cont_750_bf_scaffold_874
Species: Rhizobium tropici (76.47%)
17 20924 bp 60.59 16.20 93.61
SCNpilot_cont_750_bf_scaffold_1073
Order: Rhizobiales (85.71%)
14 15818 bp 64.98 12.58 85.78
SCNpilot_cont_750_bf_scaffold_1190
Class: Alphaproteobacteria (53.85%)
13 14235 bp 47.76 11.63 89.55
SCNpilot_cont_750_bf_scaffold_2483
Class: Alphaproteobacteria (66.67%)
12 7868 bp 56.48 13.89 69.43
SCNpilot_cont_750_bf_scaffold_1716
Species: Rhizobium tropici (72.73%)
11 10091 bp 59.44 13.90 89.46
SCNpilot_cont_750_bf_scaffold_1989
Genus: Rhizobium (63.64%)
11 9092 bp 58.13 13.58 81.01
SCNpilot_cont_750_bf_scaffold_4412
Genus: Rhizobium (54.55%)
11 5643 bp 54.65 13.56 81.87
SCNpilot_cont_750_bf_scaffold_2773
Species: Afipia felis (60%)
10 11230 bp 61.59 9.44 86.10
SCNpilot_cont_750_bf_scaffold_2692
Order: Rhizobiales (88.89%)
9 7519 bp 57.75 14.26 82.43
SCNpilot_cont_750_bf_scaffold_11476
Genus: Rhizobium (50%)
8 3039 bp 55.45 14.64 59.92
SCNpilot_cont_750_bf_scaffold_2798
Genus: Rhizobium (50%)
8 9054 bp 56.48 14.63 83.70
SCNpilot_cont_750_bf_scaffold_2061
Genus: Devosia (50%)
8 8862 bp 59.44 14.98 87.41
SCNpilot_cont_750_bf_scaffold_1909
Species: Agrobacterium rhizogenes (85.71%)
7 9351 bp 57.04 13.23 88.55
SCNpilot_cont_750_bf_scaffold_1259
Species: Rhizobium tropici (57.14%)
7 13526 bp 60.79 17.52 92.78
SCNpilot_cont_750_bf_scaffold_3902
Order: Rhizobiales (100%)
6 6059 bp 59.65 14.77 79.42
SCNpilot_cont_750_bf_scaffold_5318
Order: Rhizobiales (50%)
4 5040 bp 55.06 13.74 83.45
SCNpilot_cont_750_bf_scaffold_6168
Genus: Rhizobium (50%)
4 4579 bp 56.78 14.91 57.52
SCNpilot_cont_750_bf_scaffold_26038
Genus: Rhizobium (100%)
3 1537 bp 61.68 16.59 95.64
Displaying items 51-70 of 70 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.