ggKbase home page

SCNpilot_cont_750_bf_scaffold_573_39

Organism: SCNPILOT_CONT_300_BF_Novosphingobium_63_714

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 49849..51711

Top 3 Functional Annotations

Value Algorithm Source
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.8
  • Coverage: 620.0
  • Bit_score: 1138
  • Evalue 0.0
phosphomethylpyrimidine synthase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B7AA00 similarity UNIREF
DB: UNIREF100
  • Identity: 88.4
  • Coverage: 621.0
  • Bit_score: 1122
  • Evalue 0.0
  • rbh
thiamine biosynthesis protein ThiC; K03147 thiamine biosynthesis protein ThiC similarity KEGG
DB: KEGG
  • Identity: 87.9
  • Coverage: 621.0
  • Bit_score: 1094
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1863
ATGGCCGACATCAACTCCCCCCTTGAAATTGGCGTTACCACCGGCGCGATCCGTGGCTCGAAAAAGATCTACGTCCCCTCGCCCAGCCATCCCGAAATCAAGGTTGCCATGCGCGAAATCGCGCTGGAGTCGTCGGCCAACGAACCGGCCGTGCGGGTCTATGACACGTCCGGGCCCTATACCGATCCCAATGCCACGATCGACATTTCGGCGGGCCTTGCCCCGCTGCGCCGCGAATGGATCCTGGCGCGCGGCGATGTCGAGGAATATGACGCCCGCGCGGTCAAGCCCGAGGACAATGGCCTTAAAGGTCCGGATCGCAGCGGCGGCGTGCCCGCCTTCCCGGCGGTCAACCCCCGCCCGCTGCGCGCCAAGGCGGGCGCCAATGTGTCGCAGATGCATTATGCCCGCCGCGGCATCGTCACGCCCGAAATGGAATATGTGGCGCAGCGCGAAAACCTTGGCCGCGCGATCCTGAAGGAAAAGCTGGAGCGCGACGGGCAGAGCTGGGGCGCGGAAATCCCCGATTTCGTCACCGGCGAATTCGTGCGGTCCGAAGTGGCGCGGGGCCGCGCGATCATTCCCAGCAACATCAACCACCCCGAATCCGAGCCCATGGCGATCGGCCGCAATTTTCTGGTAAAGATCAACGCCAATATCGGCAATTCGGCCGTGGCCTCGGACGTGGCCAGCGAAGTGGACAAGATGGTCTGGGCCATCCGCCACGGCGCCGACACGGTGATGGACCTGTCCACGGGCCGCAACATCCATGACACGCGCGAATGGATCCTGCGCAACAGCCCCGTTCCCATCGGCACCGTGCCGATCTATCAGGCGCTGGAAAAGGTGGGCGGCATTGCCGAGGACCTGAACTGGGAAATCTTCCGCGACACGCTGATCGAACAGGCCGAACAGGGCGTCGACTATTTCACCATCCACGCGGGCGTGCGCCTGCCCTATATCCCGCTGACCGCCAAGCGCGTGACGGGGATCGTGTCGCGCGGCGGCTCGATCATGGCCAAGTGGTGTCTGGCCCATCACAAGGAATCGTTCCTTTACGAGCGTTTCGACGAGATCACCGAGATCATGAAGGCCTATGACGTAGCCTATTCGCTGGGCGACGGTCTACGCCCCGGCTCGATTGCCGATGCCAATGACGAGGCGCAGTTTGCCGAACTCTACACCCTTGGCGAGCTGACCAAGCGCGCGTGGGAGCAGGACGTTCAGGTGATGATCGAAGGCCCCGGCCATGTGCCGATGCACAAGATCAAGGAGAACATGGACAAGCAGCTCGCCGCATGCGGTGAAGCTCCGTTCTACACGCTCGGGCCGCTCGTCACCGATATTGCGCCGGGTTATGACCACATCACGTCGGGCATTGGCGCGGCGATGATTGGCTGGTTCGGCACCGCCATGCTCTGCTATGTCACGCCCAAGGAGCACCTTGGCCTGCCCGACCGCGATGACGTCAAGGTTGGTGTCGTCACCTACAAGCTGGCCGCCCACGCGGCCGACCTTGCCAAGGGCCACCCGGCGGCCAAGCTGCGCGACGATGCCCTGTCGCGCGCACGCTTCGAATTCCGCTGGCGCGATCAGTTCAACCTGTCGCTCGACCCGGACACCGCCGAGCAGTATCACGACCAGACTCTGCCCGCAGAAGGGGCCAAGACCGCCCACTTCTGCTCGATGTGCGGACCGAAATTCTGCTCGATGAAGATCACGCAGGAAGTGCGCGACTTTGCCGCCAAGCAGAACGCGCCGATTGAGACGTTTGCCGCCGCCGAGGATGCCGAGGCCGGCATGGCCCAGATGAGCGAGAAGTATAAGGAAGCGGGCGATCTCTACATTCCGGCTGCGGAATAA
PROTEIN sequence
Length: 621
MADINSPLEIGVTTGAIRGSKKIYVPSPSHPEIKVAMREIALESSANEPAVRVYDTSGPYTDPNATIDISAGLAPLRREWILARGDVEEYDARAVKPEDNGLKGPDRSGGVPAFPAVNPRPLRAKAGANVSQMHYARRGIVTPEMEYVAQRENLGRAILKEKLERDGQSWGAEIPDFVTGEFVRSEVARGRAIIPSNINHPESEPMAIGRNFLVKINANIGNSAVASDVASEVDKMVWAIRHGADTVMDLSTGRNIHDTREWILRNSPVPIGTVPIYQALEKVGGIAEDLNWEIFRDTLIEQAEQGVDYFTIHAGVRLPYIPLTAKRVTGIVSRGGSIMAKWCLAHHKESFLYERFDEITEIMKAYDVAYSLGDGLRPGSIADANDEAQFAELYTLGELTKRAWEQDVQVMIEGPGHVPMHKIKENMDKQLAACGEAPFYTLGPLVTDIAPGYDHITSGIGAAMIGWFGTAMLCYVTPKEHLGLPDRDDVKVGVVTYKLAAHAADLAKGHPAAKLRDDALSRARFEFRWRDQFNLSLDPDTAEQYHDQTLPAEGAKTAHFCSMCGPKFCSMKITQEVRDFAAKQNAPIETFAAAEDAEAGMAQMSEKYKEAGDLYIPAAE*