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SCNpilot_cont_750_bf_scaffold_194_17

Organism: SCNPILOT_CONT_300_BF_Actinomycetales_73_43

near complete RP 48 / 55 MC: 1 BSCG 49 / 51 ASCG 14 / 38
Location: comp(19333..20013)

Top 3 Functional Annotations

Value Algorithm Source
2'-5' RNA ligase; K01975 2'-5' RNA ligase [EC:6.5.1.-] similarity KEGG
DB: KEGG
  • Identity: 60.1
  • Coverage: 218.0
  • Bit_score: 245
  • Evalue 2.10e-62
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.1
  • Coverage: 218.0
  • Bit_score: 245
  • Evalue 9.40e-62
2'-5' RNA ligase n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H7U7_CELFA similarity UNIREF
DB: UNIREF100
  • Identity: 60.1
  • Coverage: 218.0
  • Bit_score: 245
  • Evalue 6.70e-62

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Taxonomy

Cellulomonas fimi → Cellulomonas → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 681
GTGCGGTTGTTCGCGGCCGTGTGGCCGCCGGAGGACGTCCTCGACCACCTGGACCTCGCGCTGGGCGCGGTGCGGCGCACGCTGCCGGGCGACGGGACCGGGCCGGTGCGCTGGTCGGCGCGCGACACGTGGCACCTCACGTGCGCGTTCTACGGCGACGTGCCCGACGGACGGGTGGCCGAGCTGGAGTGTGCGTTGGCCGTGGCCGCCGCGAGCTCGGGGCCGTACCGGCTGCGGCTGCGCGGCGCCGGGGTCTTCTCCCACCGGACGCTGTGGGTGGGTGTCGGTGGCGACACCGGGGCGCAGCTGGCGCTCGCGCACGCGGCGGTCGCGGCGGGCGACCGCGTCGGCGCCCGGCCCGACGACCGGCCGCGTGAGCGGGCCCACCTGACCATCGGGCGCGTCCGCGACCCCGGCGGACGGCGCGGGCGGGGGAGCGCGGCGCGCGCGGGCGCCGCGGGGCGGCCGAGGAGCGAGAACGGCTGGGTGCCGTTCGACGCGGAGACGCTCGTCGGCGCGCTGGCCGTGTACGAGGGCCCGGAGTGGACCGTCGACGCGCTGCTGCTCATCGCCTCGCGCCCCGGCGAGGGTCGCGGCGGCGGCCCGCTCTACACCGCCGTCGACGCCTTCCCGCTGGCCGGGATGAGCGACGAGGGCGGTGTGGCACCATGGGCGCCGTGA
PROTEIN sequence
Length: 227
VRLFAAVWPPEDVLDHLDLALGAVRRTLPGDGTGPVRWSARDTWHLTCAFYGDVPDGRVAELECALAVAAASSGPYRLRLRGAGVFSHRTLWVGVGGDTGAQLALAHAAVAAGDRVGARPDDRPRERAHLTIGRVRDPGGRRGRGSAARAGAAGRPRSENGWVPFDAETLVGALAVYEGPEWTVDALLLIASRPGEGRGGGPLYTAVDAFPLAGMSDEGGVAPWAP*