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SCNpilot_cont_750_bf_scaffold_79

Search features with annotation key words

Displaying items 211-240 of 564 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_79_211
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

234046..234672
DNA (627bp) protein (209aa)
Transcriptional regulator, TetR family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RAC5_LEIAQ rbh
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ERK72210.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
TetR family transcriptional regulator
SCNpilot_cont_750_bf_scaffold_79_212
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(234689..236827)
DNA (2139bp) protein (713aa)
ptrB; oligopeptidase B; K01354 oligopeptidase B [EC:3.4.21.83] rbh
protease n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00037DAFBF rbh
Protease II {ECO:0000313|EMBL:AAT88267.1}; TaxID=281090 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. xyli (strain CTCB07).;"
SCNpilot_cont_750_bf_scaffold_79_213
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(236832..238304)
DNA (1473bp) protein (491aa)
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI000378FCD2 rbh
Uncharacterized protein {ECO:0000313|EMBL:AHX16457.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_79_214
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(238347..239240)
DNA (894bp) protein (298aa)
ROK family protein; K00845 glucokinase [EC:2.7.1.2]
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI000367216A
ROK family protein {ECO:0000313|EMBL:ABS01603.1}; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 /; SRS30216).;"
SCNpilot_cont_750_bf_scaffold_79_215
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(239237..239977)
DNA (741bp) protein (247aa)
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI0003655682 rbh
Copper homeostasis protein CutC family protein {ECO:0000313|EMBL:ERK66437.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
CutC family protein; K06201 copper homeostasis protein
SCNpilot_cont_750_bf_scaffold_79_216
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(239974..240972)
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI0003613711 rbh
Asparaginase {ECO:0000313|EMBL:KGH45660.1}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
L-asparaginase II rbh
SCNpilot_cont_750_bf_scaffold_79_217
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(240965..241900)
DNA (936bp) protein (312aa)
ABC transporter, permease protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RPJ4_LEIAQ rbh
ABC transporter, permease protein {ECO:0000313|EMBL:ERK70771.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
polar amino acid ABC transporter inner membrane protein; K10007 glutamate transport system permease protein
SCNpilot_cont_750_bf_scaffold_79_218
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(241897..242541)
DNA (645bp) protein (215aa)
ABC transporter, permease protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T7T6_LEIAQ rbh
ABC transporter, permease protein {ECO:0000313|EMBL:ERK70772.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
binding-protein-dependent transporter inner membrane component; K10006 glutamate transport system permease protein
SCNpilot_cont_750_bf_scaffold_79_219
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(242608..243552)
DNA (945bp) protein (315aa)
ABC transporter glutamine-binding protein GlnH family protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2SZT6_LEIAQ rbh
ABC transporter glutamine-binding protein GlnH family protein {ECO:0000313|EMBL:ERK70773.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
extracellular solute-binding protein; K10005 glutamate transport system substrate-binding protein
SCNpilot_cont_750_bf_scaffold_79_220
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(243672..244424)
DNA (753bp) protein (251aa)
glutamate ABC transporter ATP-binding protein; K10008 glutamate transport system ATP-binding protein [EC:3.6.3.-]
Glutamate ABC transporter, ATP-binding protein GluA n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RQA6_LEIAQ rbh
Glutamate ABC transporter, ATP-binding protein GluA {ECO:0000313|EMBL:ERK70774.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_cont_750_bf_scaffold_79_221
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

244585..245787
DNA (1203bp) protein (401aa)
ROK family protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R6A0_LEIAQ rbh
ROK family protein {ECO:0000313|EMBL:ERK70775.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
transcriptional regulator/sugar kinase rbh
SCNpilot_cont_750_bf_scaffold_79_222
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

245784..246716
DNA (933bp) protein (311aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI000365BD38 rbh
Oxidoreductase family, alpha/beta domain protein {ECO:0000313|EMBL:ERK70374.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
NADH-dependent dehydrogenase
SCNpilot_cont_750_bf_scaffold_79_223
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

246727..248457
DNA (1731bp) protein (577aa)
alpha amylase; K01182 oligo-1,6-glucosidase [EC:3.2.1.10]
Oligo-1,6-glucosidase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R536_LEIAQ rbh
Oligo-1,6-glucosidase {ECO:0000313|EMBL:ERK70375.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_cont_750_bf_scaffold_79_224
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

248517..248957
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RNG1_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK70376.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
activator of Hsp90 ATPase 1 family protein
SCNpilot_cont_750_bf_scaffold_79_225
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(248965..249498)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T6N6_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK70377.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
TetR family transcriptional regulator
SCNpilot_cont_750_bf_scaffold_79_226
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(249606..251897)
DNA (2292bp) protein (764aa)
Transglycosylase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2SYQ8_LEIAQ rbh
Transglycosylase {ECO:0000313|EMBL:ERK70378.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
penicillin-binding protein rbh
SCNpilot_cont_750_bf_scaffold_79_227
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(251980..252444)
DNA (465bp) protein (155aa)
Transcriptional regulator, MarR family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RP79_LEIAQ
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ERK70379.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
MarR family transcriptional regulator
SCNpilot_cont_750_bf_scaffold_79_228
unknown

Not on your lists

comp(252851..252949)
DNA (99bp) protein (33aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_79_229
unknown

Not on your lists

comp(253098..253604)
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI0003780A62
SCNpilot_cont_750_bf_scaffold_79_230
Aeromicrobium marinum, Aeromicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(253601..254209)
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI000370B59F
Sigma-70 region 2 {ECO:0000313|EMBL:EFQ82586.1}; TaxID=585531 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Aeromicrobium.;" source="Aeromicrobium marinum DSM 15272.;"
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_cont_750_bf_scaffold_79_231
Rathayibacter toxicus, Rathayibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

254761..254922
DNA (162bp) protein (54aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00037A4471
Strain 70137, complete genome {ECO:0000313|EMBL:AJM77092.1}; TaxID=145458 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Rathayibacter.;" source="Rathayibacter toxicus.;"
SCNpilot_cont_750_bf_scaffold_79_232
unknown

Not on your lists

comp(255586..256371)
DNA (786bp) protein (262aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_79_233
unknown

Not on your lists

comp(256477..256758)
DNA (282bp) protein (94aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_79_234

Not on your lists

comp(256814..258733)
DNA (1920bp) protein (640aa)
Alpha-L-arabinofuranosidase B, catalytic (Fragment) n=1 Tax=uncultured organism RepID=T1WA79_9ZZZZ rbh
Alpha-L-arabinofuranosidase B, catalytic {ECO:0000313|EMBL:AGU11902.1}; Flags: Fragment;; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
alpha-L-arabinofuranosidase rbh
SCNpilot_cont_750_bf_scaffold_79_235

Not on your lists

comp(258902..259981)
DNA (1080bp) protein (360aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00036C442C rbh
Periplasmic binding protein-like domain {ECO:0000313|EMBL:AGU11901.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator
SCNpilot_cont_750_bf_scaffold_79_236
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(260032..261876)
DNA (1845bp) protein (615aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00035CE789 rbh
Glycoside hydrolase {ECO:0000313|EMBL:KHK95923.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
glycoside hydrolase
SCNpilot_cont_750_bf_scaffold_79_237

Not on your lists

comp(261873..263207)
DNA (1335bp) protein (445aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00037EB7B1 rbh
Glycosyl hydrolase family 1 {ECO:0000313|EMBL:AGU11894.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
family 1 glycoside hydrolase
SCNpilot_cont_750_bf_scaffold_79_238

Not on your lists

comp(263204..264088)
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI0003736F17 rbh
Binding-protein-dependent transport system inner membrane component {ECO:0000313|EMBL:AGU11893.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
sugar ABC transporter permease; K02026 multiple sugar transport system permease protein rbh
SCNpilot_cont_750_bf_scaffold_79_239

Not on your lists

comp(264078..265019)
DNA (942bp) protein (314aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00036D3371 rbh
Binding-protein-dependent transport system inner membrane component {ECO:0000313|EMBL:AGU11892.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
sugar ABC transporter permease; K02025 multiple sugar transport system permease protein rbh
SCNpilot_cont_750_bf_scaffold_79_240

Not on your lists

comp(265016..266272)
DNA (1257bp) protein (419aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI000362E4E1 rbh
Bacterial extracellular solute-binding protein {ECO:0000313|EMBL:AGU11891.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein
Displaying items 211-240 of 564 in total

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