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SCNpilot_cont_750_bf_scaffold_549_1

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_67_36

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 MC: 1 ASCG 11 / 38
Location: comp(2..871)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.7
  • Coverage: 290.0
  • Bit_score: 526
  • Evalue 2.70e-146
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 83.4
  • Coverage: 290.0
  • Bit_score: 484
  • Evalue 2.00e-134
DNA-directed RNA polymerase subunit beta'''' n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00035FECB9 similarity UNIREF
DB: UNIREF100
  • Identity: 92.8
  • Coverage: 290.0
  • Bit_score: 534
  • Evalue 7.10e-149

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Taxonomy

Sphingomonas sp. RIT328 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 870
ATGCGCGGCCTGATGGCCAAGCCGTCGGGCGAGATCATCGAGACGCCGATCATCTCGAACTTCAAGGAGGGCCTGACCGTCCTTGAATACTTCAACTCCACCCACGGCGCCCGCAAGGGTCTCGCGGACACGGCGCTGAAGACCGCGAACTCGGGTTACCTCACCCGCCGCCTCGTCGACGTGTCGCAGGATTGCGTCATCGTCGAGGAGGATTGCGGCACCGATCGCGCGCTGGAGATGAAGGCGATCGTGCAGGGCGGCTCGACCATCGCGTCGCTCGGCGAGCGCATCCTCGGCCGCACCACGGCGGAGGATATCGTCGACGCCAAGTCCGGCGAGATCGTCATCCCGACCGGCACGCTGCTGGACGAAGCGGCGGTCGCGGTGATCGAGGGCATCGGCATCCAGTCGGTCAAGATCCGCAGCCCGCTGGTCTGCGAATCGAAGATCGGCGTGTGCGGCAAGTGCTACGGGCGCGATCTCGCGCGCGGCACGCCGGTCAACATCGGCGAGGCGGTGGGCGTTATCGCCGCGCAGTCGATCGGCGAGCCGGGCACGCAGCTCACGATGCGTACGTTCCACATCGGCGGCGCGGCGCAGCTCAACGAAACCTCGAACCTGGAGGCGCATGCCGACGGCACCGTGGAGTTCCGCGACCTGCGCGTGATCGAGGACCAGCGCGGCCGCCGCGTCGTGCTGAGCCGCTCGGGCGAGATGGTGATCAAGGACATGGACGGCCGCGAGCTGTCGGTCGATCGCATCCCGTACGGCGCCTATGTCATGTTCGACGACGGCCATATCGTCTCCAAGGGCGATCGCATGGCCGAGTGGGATCCGTTCACCATGCCGGTGATCACCGAGACCGGCGGC
PROTEIN sequence
Length: 290
MRGLMAKPSGEIIETPIISNFKEGLTVLEYFNSTHGARKGLADTALKTANSGYLTRRLVDVSQDCVIVEEDCGTDRALEMKAIVQGGSTIASLGERILGRTTAEDIVDAKSGEIVIPTGTLLDEAAVAVIEGIGIQSVKIRSPLVCESKIGVCGKCYGRDLARGTPVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQLNETSNLEAHADGTVEFRDLRVIEDQRGRRVVLSRSGEMVIKDMDGRELSVDRIPYGAYVMFDDGHIVSKGDRMAEWDPFTMPVITETGG