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SCNpilot_cont_750_bf_scaffold_549_4

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_67_36

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 MC: 1 ASCG 11 / 38
Location: comp(2990..6943)

Top 3 Functional Annotations

Value Algorithm Source
rpoB; DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 80.0
  • Coverage: 999.99
  • Bit_score: 2137
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.0
  • Coverage: 999.99
  • Bit_score: 2137
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IS72_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 80.0
  • Coverage: 999.99
  • Bit_score: 2137
  • Evalue 0.0

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Taxonomy

Sphingobium sp. SYK-6 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3954
ATGGCAACCAAGGCGATCGAGGGCGCTACCACGCCCAAGCGGCGCATCCGCAAGGTGTTCGGCAACATCCACGAAGTGGTGCAGATGCCGAACCTCATCGAGGTGCAGCGCGAAAGCTACGAGCAGTTCCTGCGCTCCGATCCCTCGATCGGCTATGTCTCGGGCCTGGAGAAGACGCTGCGCAGCGTCTTCCCGATCCGCGACTTCGCCGGCACCGCCGAGCTGGATTTCGTCAACTACGAGCTTGAGCCGCCGAAGTTCGACGTCGAGGAATGTCGCCAGCGCGGCATCACCTATGCCGCCCCGATGCGCGTCACGCTGCGCCTGATCGTGTTCGAGGTGGACCCGGATACGGAAACCCGCTCCGTGCTCGATATCAAGGAGCAGGACGTGTACATGGGCGACATGCCGCTCATGACCGAGAACGGCACCTTCTTCATCAACGGCACCGAGCGCGTCATCGTCAGCCAGATGCACCGGTCGCCGGGCGTGCTGTTCGATCACGATCGCGGCAAGACCCATGCGTCCGGCAAGTATCTGTTCGCCGCGCGCGTGATCCCCTATCGCGGCTCGTGGCTCGATTTCGAGTTCGACGCGAAGGACATCGTCAACGTCCGCATCGACCGGAAGCGCAAGCTGCCGGTGACGGCGCTGCTGTACGCGCTCGGCCTCAATTCCGAGGAAATCCTCAATCATTTCTACAACCGCCTCACCTTCGTTCGCGGCGAGGGCGGGTGGAAGATTCCGTTCCAGCCGGAGAACTGGCGCGGCGTGAAGCCGATGTTCGACATCGTCGACGGCAATTCGGGCGAGATCGTCTTCCCGGCCGGGCAGAAGATCAGCCCGCGCGCCGCCAACAAGGCGGCGAAGGACGGTCTCACCGACCTGCTGATCCCGACCGAGGAGATCTACGGCCGCTATTCGGCCTATGACCTCATCAACGAGGCGACCGGCGAGATCTACGTCGAGGCGGGTGACGAGATTTCGCCCGAGAACCTCGAGAAGCTCGACAAGGCGGGCGTCGATCGCATCGAGCTGCTCGACATCGATCACGTCGCTACCGGCCCGTGGATCCGCAACACGCTGTTCTTCGATCCGGACCGCTACGACCTGTCGGCGGTGGGCCGCGTCAAGCTCAACATGCGCCTCGATCTCGACACCGACGACAGCGTCACGACGCTGCGCACCGAGGATATCCTCGCGGTGGTCAAGACGCTCGTCGACCTGAAGGACGGCAAGGGCGAGATCGACGACATCGACAATCTCGGCAACCGCCGCGTCCGCTCGGTGGGCGAGCTGCTGGAGAACCAGTATCGCGTCGGCCTGCTCCGCATGGAGCGCGCCGTGAAGGAGCGCATGTCGTCAGTGGACGTGTCGACGGTCATGCCGAACGACCTGATCAACGCCAAGCCCGCCGTCGCCGCGGTGCGCGAGTTCTTCGGCTCGTCGCAGCTCTCGCAGTTCATGGACCAGACCAACCCGCTCTCCGAAGTGACGCACAAGCGCCGCGTCTCGGCGCTCGGGCCGGGCGGGTTGACCCGCGAGCGCGCGGGCTTCGAGGTCCGCGACGTCCACCCGACGCACTACGGCCGCATCTGCCCGATCGAGACGCCGGAAGGCCCGAACATCGGCCTGATCAACTCGCTGGCGAGCTTCAGCCGCGTCAACAAGTACGGCTTCATCGAGACGCCGTACCGCAAGGTGATCGACGGCAAGGTCACCAACGAGGTGGTCTATCTCTCCGCGATGGAGGAAGCCAAGCACACGATCGCGCAGGCCAACGCCGAGGTCGACACGGACGGCCGCCTCACCGAGGAGCTGATCTCCGCGCGTCAGGCGGGCGAGTTCCTGATGGCGCTGCCTGAGACGATCACGCTGATGGACGTGTCGCCGAAGCAGCTCGTGTCGGTCGCCGCCTCGCTGATCCCGTTCCTTGAGAACGACGACGCGAACCGCGCGCTGATGGGCTCGAACATGCAGCGTCAGGCGGTGCCTTTGGTCAAGGCCGAGGCGCCGTTCGTCGGCACCGGCATGGAGGAGACGGTCGCGCGCGATTCCGGCGCCGCCATCGCCGCCCGCCGCGCCGGCGTGATCGACCAGGTCGATGCCAGCCGCATCGTCGTCCGCGCGACGGGCGAGGTTTCGGCCGAGGAATCGGGTGTCGACATCTACACGCTGATGAAGTTCCAGCGCTCCAACCAGTCGACCTGCATCAACCAGCGCCCGCTGGTGAAGGTGGGCGACGTGGTGCGCGCCGGCGACATCATCGCCGACGGCCCGTCGACCGAATTCGGCGAGCTGGCGCTGGGCCGCAACGCGCTCGTCGCGTTCATGCCGTGGAACGGCTACAACTACGAGGACTCGATCCTCATCTCCGAGCGGATCGTGAAGGACGACGTGTTCACCTCGATCCACATCGACGAGTTCGAGGTGGCCGCCCGCGACACGAAGCTCGGGCCGGAGGACATCACCCGCGACATCCCGAACGTCGGCGAGGAGGCGCTGCGCAACCTCGACGAGGCGGGCATCGTCTATATCGGTGCCGAGGTGGAGCCGGGCGACATCCTCGTCGGCAAGATCACGCCGAAGGGCGAAAGCCCGATGACGCCGGAGGAGAAATTGCTCCGCGCGATCTTCGGCGAGAAGGCGAGCGACGTGCGCGACAGCGCGATGGCGATCGAGCGCGAGGAGATCGAGCGCCTGAAGAAGGACTCGGACGACGAGCGCACGATCCTCAACCGCGCCACCTGGTCGCGCCTGCGCGAGATGCTGCTGGATCAGGTCGCCACGGCGGCCCCCAAGGGCGTGCGCAAGGGCGTGACGATCGACGCCGAGGTGCTGGATTCGGTGGACCGCCACGAATGGTGGAAGTTCGCCGTGCAGGACGACAAGGTCCAGGGCGACCTGGAGACCGTCAAGGCGCAGTATGACGAGGCCGCCAAGCGGATCACCGACAAGTTCCACGACCGGCGCGAGAAGCTGGAGCGTGGCGACGAGTTGCCGCCGGGCGTGCTGAAGATGGTCAAGGTGTTCGTCGCGGTGAAGCGCAAGCTCCAGCCGGGCGACAAGATGGCCGGCCGTCACGGCAACAAGGGCGTCATCAGCCGCATCCTGCCGCAGGAGGACATGCCGTTCCTCGCGGACGGCACGCCGGTCGATCTGGTGCTCAACCCGCTGGGCGTGCCGTCGCGCATGAACGTCGGGCAGATCTTCGAGACCCATCTCGGCTGGGCCGCGCGCGGCCTCGGCCAGCAGGTTTCGCAGGCGCTGGAGGATTGGCGCGAGGCGAACCCCGATGCCCGCCCCGGCGCGATGCCGGAGCCGGTGAAGGATCGCCTGCGCACGATCTACGGCGAGCATTATCTCGCCGATATCGACGCGCGTGACGGCGAGGGCATCGTCGAGCTGGCGGAGAACCTGACGCGCGGCGTGCCGATGGGGACGCCGGTGTTCGACGGCGCGGTCGAGGCCGATGTCGCGGACATGCTGGAGCTGGCGGGCCTCGACCCGTCGGGCCAGTCGGACCTGTTCGACGGGCGCACCGGCGAGAAGTTCGACCGCAAGGTGACGGTGGGCATCATCTACATGCTCAAGCTGCACCACCTCGTGGACGACAAGATCCACGCGCGCTCGATCGGGCCGTACAGCCTCGTCACCCAGCAGCCGCTGGGCGGCAAGGCGCAGTTCGGCGGCCAGCGCTTCGGTGAGATGGAGGTGTGGGCGCTGCAGGCATATGGCGCCGCCTACACGCTCCAGGAGATGCTGACGGTGAAGTCCGACGACGTGGTCGGCCGCACCAAGGTCTATGAGGCGATCGTCAAGGGCGACGACACGTTCGAGGCCGGCATCCCGGAGAGCTTCAACGTGCTCGTCAAGGAAATGCGCTCGCTCGGCCTCAACGTCGATCTCAAGTCGATGGACGAGGACGACGGTCTGGCCGAGGCGGCGGAGTAA
PROTEIN sequence
Length: 1318
MATKAIEGATTPKRRIRKVFGNIHEVVQMPNLIEVQRESYEQFLRSDPSIGYVSGLEKTLRSVFPIRDFAGTAELDFVNYELEPPKFDVEECRQRGITYAAPMRVTLRLIVFEVDPDTETRSVLDIKEQDVYMGDMPLMTENGTFFINGTERVIVSQMHRSPGVLFDHDRGKTHASGKYLFAARVIPYRGSWLDFEFDAKDIVNVRIDRKRKLPVTALLYALGLNSEEILNHFYNRLTFVRGEGGWKIPFQPENWRGVKPMFDIVDGNSGEIVFPAGQKISPRAANKAAKDGLTDLLIPTEEIYGRYSAYDLINEATGEIYVEAGDEISPENLEKLDKAGVDRIELLDIDHVATGPWIRNTLFFDPDRYDLSAVGRVKLNMRLDLDTDDSVTTLRTEDILAVVKTLVDLKDGKGEIDDIDNLGNRRVRSVGELLENQYRVGLLRMERAVKERMSSVDVSTVMPNDLINAKPAVAAVREFFGSSQLSQFMDQTNPLSEVTHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLASFSRVNKYGFIETPYRKVIDGKVTNEVVYLSAMEEAKHTIAQANAEVDTDGRLTEELISARQAGEFLMALPETITLMDVSPKQLVSVAASLIPFLENDDANRALMGSNMQRQAVPLVKAEAPFVGTGMEETVARDSGAAIAARRAGVIDQVDASRIVVRATGEVSAEESGVDIYTLMKFQRSNQSTCINQRPLVKVGDVVRAGDIIADGPSTEFGELALGRNALVAFMPWNGYNYEDSILISERIVKDDVFTSIHIDEFEVAARDTKLGPEDITRDIPNVGEEALRNLDEAGIVYIGAEVEPGDILVGKITPKGESPMTPEEKLLRAIFGEKASDVRDSAMAIEREEIERLKKDSDDERTILNRATWSRLREMLLDQVATAAPKGVRKGVTIDAEVLDSVDRHEWWKFAVQDDKVQGDLETVKAQYDEAAKRITDKFHDRREKLERGDELPPGVLKMVKVFVAVKRKLQPGDKMAGRHGNKGVISRILPQEDMPFLADGTPVDLVLNPLGVPSRMNVGQIFETHLGWAARGLGQQVSQALEDWREANPDARPGAMPEPVKDRLRTIYGEHYLADIDARDGEGIVELAENLTRGVPMGTPVFDGAVEADVADMLELAGLDPSGQSDLFDGRTGEKFDRKVTVGIIYMLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALQAYGAAYTLQEMLTVKSDDVVGRTKVYEAIVKGDDTFEAGIPESFNVLVKEMRSLGLNVDLKSMDEDDGLAEAAE*