ggKbase home page

SCNpilot_cont_750_bf_scaffold_583_42

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(41672..42610)

Top 3 Functional Annotations

Value Algorithm Source
DNA polymerase LigD, polymerase domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQH8_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 73.8
  • Coverage: 309.0
  • Bit_score: 465
  • Evalue 4.40e-128
  • rbh
DNA polymerase LigD, polymerase domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 73.8
  • Coverage: 309.0
  • Bit_score: 465
  • Evalue 1.40e-128
  • rbh
DNA polymerase LigD, polymerase domain protein {ECO:0000313|EMBL:AEA22576.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.8
  • Coverage: 309.0
  • Bit_score: 465
  • Evalue 6.10e-128

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 939
ATGGGTGAATCGCGCGACGGTGTGGAGCTGACCAGCCTCGACAAACCCCTGTTCGACGATTCGGGTGCCACCAAGCGCGATCTCATCGACTATCTGGACGCCGTCGGCGACCGCATCCTGCCGGTCCTGCGCAACCGTCCGCTCTCGGTCATGCGGGTCCGCCCCGGGCAGGCCCCGTTCATGCAGAAGAACACGCCGAAGTACGCGCCGGACTGGATCGCCACCACCACGGTGTGGGCGCAGACGTCGCACCGCGAGGTCGCCTACCCGCTGTGCGACGACCGGCGCACGCTGCTCTGGTTCGCGAACCAACGGTCGATCGAGTTCCATCCCACGCTCATCGAGGTGGGGGCCGAGCACCCCAGCCACCTCGTGATGGACCTCGACCCGCCCGACGGTGGCACGTTCGACCACGTGGTTCGCGCCGCCCGGCTCGTCGAGCGGGCGCTGGCCGATCTCGGGCTGGACGGCGCGGTGAAGACGAGCGGCGCCAAGGGCCTGCACGTGTTCGTGCCGATCGCCGGCACCTCGTTCGACGACGCCGCCGCGGCCACCCGGGCCCTGGCCGCCCGCGCCGAACGCCTCGACCCCGGGGTCGCCACCACGGCGTTCATCAAGGACGACCGGGAGGGCAAGGTCTTCCTCGATCCCACCCGCGCGGGCGGGGCCACGGTGGTCGCGGCCTACAGCCCGCGCATCCGTCCCGGCGTGCCCGTCTCCTTCCCCGTGACGTGGGCCGAGCTCGACGACGTGACGCCAGCCGACTTCACGGTCCACACGGCCGTCGAGCGGCTCGGGGACGCCGACCCGTGGCGCGACCGCATGCCCGCCCCGCAGCCGCTGCCCGCCGACCTGGTGGCGGAGGGCCACACGATCCCGGTCCCCCGCGTCGTGGCCATGCACGAGGGGAAGCGGCGCAAGCGGGCCGCCGGCGGGTAG
PROTEIN sequence
Length: 313
MGESRDGVELTSLDKPLFDDSGATKRDLIDYLDAVGDRILPVLRNRPLSVMRVRPGQAPFMQKNTPKYAPDWIATTTVWAQTSHREVAYPLCDDRRTLLWFANQRSIEFHPTLIEVGAEHPSHLVMDLDPPDGGTFDHVVRAARLVERALADLGLDGAVKTSGAKGLHVFVPIAGTSFDDAAAATRALAARAERLDPGVATTAFIKDDREGKVFLDPTRAGGATVVAAYSPRIRPGVPVSFPVTWAELDDVTPADFTVHTAVERLGDADPWRDRMPAPQPLPADLVAEGHTIPVPRVVAMHEGKRRKRAAGG*