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SCNpilot_cont_750_bf_scaffold_712_39

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(27501..29300)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, CdaR {ECO:0000313|EMBL:AFP40407.1}; EC=5.3.1.23 {ECO:0000313|EMBL:AFP40407.1};; TaxID=246196 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.3
  • Coverage: 593.0
  • Bit_score: 406
  • Evalue 6.50e-110
Transcriptional regulator, CdaR n=2 Tax=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) RepID=I7G4A3_MYCS2 similarity UNIREF
DB: UNIREF100
  • Identity: 43.3
  • Coverage: 593.0
  • Bit_score: 406
  • Evalue 4.60e-110
  • rbh
GAF domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 43.3
  • Coverage: 593.0
  • Bit_score: 406
  • Evalue 1.40e-110
  • rbh

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Taxonomy

Mycobacterium smegmatis → Mycobacterium → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1800
ATGAGCGCGGTGGGGGAGATCGCGCGGGCCGTCAACGCCGCCGAGCCGCTGGACGGCGTGCTGGCCCGGGTCGCCGAGCAGGCCTGTGCGCTGATCGGGTTCGAGTACTGCGCCGTGATGCTGGCCGAGCCCGGCGAGGAGCACCTGCGGGTCGCCGGCTCGTGGGGGCTCTCGCGCGACTACGTCGCCCTCGTCAGCGACACCGGGTCGCTGCTCATCCACCCGGCCGGCCCGAACCTGGACTCGCCCGCCGCCGAGGCCTACCGGGCGGGCCGGACCGTCGCCGTGTCCGACGTCGGGAACGCGGTGAGGTACGGGCGGCTGCGGCACCTCGCGCCCAAGCAGGGGTACCGGGCGCTGATCGCGGCGCCGCTGCACGCCCCCGCCGCCGGGACCCTCGGGGTGGTCGTCGCCTACTCCGTGGCCGCCCGGGAGTTCGGTGCCCCGGAGGTGGAGCTCGTCGAGCTGCTGGCCGACCAGGCCGCGCTGGCGTGCGAGGCCGCGCGGCTGCGCAACGACCAGCAGAACGTGATCACCGAGCTCTCGCGGACCAACGCCGAGCTGCAGCGCAGCCGCGCGGTCACCGACTGGGCGGAACGGCAGCACCGCGCGCTCATGCGGCTGGTGCTCGACGAGGTCGGCCTGGCCGGGCTGGTCGCCGCGCTGGCCGACACGCTCGGCGCGTCCGTGACCGTCGAGGACCGCCACAGCCGGGTGCTCGCCCGCGCGCCCGCCACCGGCTACCGCGCTCCTCCGGACGAGGCCGCGCGTCGGCGCCGGCCGGTCCGGGCGGCGCTGGACACGCTCGCCCGCCACAACGAGGTGGTGGAGGTGCGCTTCGACCGCTCGGGCCGCCCCGGCGCGTCGGCCGTCGGCCATCCCGTCGGGCGCGCCCACGGCGTCTGGGTGGCGCCGGTGGTGGTCGGCGGCGAGCTGGCCGCGCGGCTGTGGGTGACCAACCCGCGCGCGGCGCCGGCCCCGGTGGAGCGCCGGGTGATCGAGCGGTTCGCGCTGGTCGTGGCGCTGGAGGTGCTCAAGCACCAGCACCTGGTGGACGTCGAGGAGCGGCTGTCGGGCGACCTGATCGGCGACCTGCTGCACCCGGGCGGGCCGCAGCACCCGCAGGGCGTGCTGGACCGGGCGGCGGCGCTGGGCCACGATCTCGACCGCCCCCACGTCGTCGCGGTGCTCGCGCTCGACCCGCCCGGGCCCACGCCCCGGCTGGCCGAGGTCGTGCGCGCGGCCGCGCGGCAGGCCACGCCGCCACTGGTCGGGCCGCACGAGGACGTCCACGTCCTGCTGTTCCCCGACGGTCCCGGTCTCGACGACGTGCTGCGCGGCGTCCTCGCGCAGGTCGAGCTGGCCCTGCCCGAGCGCACCGCGACCATCGCGATCGGGCCGGTGGCCGACGGCCTCGCCGACCACGGGTCGGCCTACCGCGTGGCCCGGGGAGCGGTGCGGCTGCGGCGCACGGCCCGTCCCGGGGGGCTCGTCGACGTCCGGGATCTCGGCCTGGCGGCGTTCCTGCTGGAGGAGGGCGCGCCCGACACGCTGCGCCGGTTCGCGCGGAACCTGCTGCGCCCCGTCGTGGCCCACGACGGCCAGCGCGGCGGCGACCTGCTCCCCACCCTGCGGGCGTGGCTCGCCGCAGGCTGCTCCACCTCGGCCACGGCACGGGCGCTCGTGGTGCACCCCAACACGGTGGGTTACCGGATCGCCAGCATCGAGAAGCTCACCGGCCGCAGCCTCCGGCGCAGCGACACCCGGCTTGCCCAGCACATCCGCGGTTGTTCTGGGTGA
PROTEIN sequence
Length: 600
MSAVGEIARAVNAAEPLDGVLARVAEQACALIGFEYCAVMLAEPGEEHLRVAGSWGLSRDYVALVSDTGSLLIHPAGPNLDSPAAEAYRAGRTVAVSDVGNAVRYGRLRHLAPKQGYRALIAAPLHAPAAGTLGVVVAYSVAAREFGAPEVELVELLADQAALACEAARLRNDQQNVITELSRTNAELQRSRAVTDWAERQHRALMRLVLDEVGLAGLVAALADTLGASVTVEDRHSRVLARAPATGYRAPPDEAARRRRPVRAALDTLARHNEVVEVRFDRSGRPGASAVGHPVGRAHGVWVAPVVVGGELAARLWVTNPRAAPAPVERRVIERFALVVALEVLKHQHLVDVEERLSGDLIGDLLHPGGPQHPQGVLDRAAALGHDLDRPHVVAVLALDPPGPTPRLAEVVRAAARQATPPLVGPHEDVHVLLFPDGPGLDDVLRGVLAQVELALPERTATIAIGPVADGLADHGSAYRVARGAVRLRRTARPGGLVDVRDLGLAAFLLEEGAPDTLRRFARNLLRPVVAHDGQRGGDLLPTLRAWLAAGCSTSATARALVVHPNTVGYRIASIEKLTGRSLRRSDTRLAQHIRGCSG*