ggKbase home page

SCNpilot_cont_750_bf_scaffold_1945_11

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(9415..10854)

Top 3 Functional Annotations

Value Algorithm Source
Integrase core domain protein n=1 Tax=Mycobacterium parascrofulaceum ATCC BAA-614 RepID=D5P1F7_9MYCO similarity UNIREF
DB: UNIREF100
  • Identity: 92.9
  • Coverage: 479.0
  • Bit_score: 903
  • Evalue 7.40e-260
  • rbh
Transposase insI for insertion sequence element IS30B/C/D {ECO:0000313|EMBL:AJQ91308.1}; TaxID=66712 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium freudenreichii subsp. freudenreichii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.7
  • Coverage: 479.0
  • Bit_score: 911
  • Evalue 4.90e-262
putative transposase similarity KEGG
DB: KEGG
  • Identity: 85.6
  • Coverage: 479.0
  • Bit_score: 848
  • Evalue 8.80e-244
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Propionibacterium freudenreichii → Propionibacterium → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1440
GTGGCGACGAAGGACTGGATCGCGAAGACGAGCGAGGTGCCCGAAGGGGCTAGACGTCAGTGGCGGGCGGATCGGGCGTTGCGGCCCCCGATGCGTTCGCCTGGGCGGCCCGAGCCCGCGCGTGCGGTGCAGCGGCAGTTCTGGCGGTTGATCGCGACGGGCATCACCTCAGCCGAGGCGGCGCTGAAGGTGGGCGTGTCTGTGCCGGTCGGCGCACGGTGGTTTCGCCACGCTGGCGGTATGCCTCCGATCTCACTGGCCGAGCCCAGCGGCCGCTACTTGTCCTTCGAGGAGCGTGAGGAGATCGCGATCCTGCACGCCAAGAACACGGGAGTGCGCGAGATCGGCCGGGCGATCGGGCGTGACCCGGGGACCGTCTCTCGCGAGCTGCGTCGCAACGCGGCCACCCGGGGAGGGAAGGCGGAGTACCGAGCGCTGGTGGCGCAGTGGAAGGCCCAGCAGGCAGCGAAACGACCGAAGACCGCGAAGCTCGCGAGCAACGACGAGCTGCGGGAGTACGTGCAGGAGCGGCTCGCTGGGGGCGTGCGCCGGCCGGACGGCAGCATCGTCGTTGGGCCGGAGCCGCCAGCATGGAAGGGGCTGAACAAGCCGCATCGGCAGGATCGGCGGTGGGCGACCGCGTGGAGTCCGGAGCAGATCTCGCACCGTTTGAAGGTCGATTTCCCGGATGATGAGTCCATGCGCATCAGCCACGAGGCGATCTACCAGTCGCTGTTCATCCAGGGCCGTGGCGCGCTCAAACGCGAACTCGTCGCCTGCCTGCGAACAGGCCGTGCGCTGCGGCAGCCGCGGGCTCGCGCGCAGAATCGCCCGCAAGGGCACGTCACCGCCGATGTCGTGTTCTCGAAGCGCCCCGCAGAGGCGGCGGACCGTGCTGTTCCCGGGCATTGGGAAGGCGACTTGATCATCGGCACCGGTCGCTCCGCCATCGGCACGATCGTAGAACGCAAGAGCCGCTCGACCCTGCTGGTGCACTTGCCGCGGCTGGACGGCTGGGGTGAGACCCCGCCGGTCAAGAACGGTCCCGCGCTGGGCGGATACGGCGCCGCGGCGATGAACGCCGCCCTGACCATGTCGATGACGACGCTGCCCGAACAGCTCCGCCAGACGCTCACCTGGGATCGCGGCAAGGAGCTCTCCGGACACGCCCAGTTCGCGCTCGAGACGGGCACGAAGGTGTTCTTCGCCGACCCCCACTCACCCTGGCAGCGGCCGACGAACGAGAACACCAACGGGCTTCTGCGGCAGTACTTCCCGAAGGGCACAGATCTCTCGCGCTGGTCCGCCGAAGATCTCGAAGCCGTCGCCCTCGCGCTCAACAACAGGCCCCGCAAGAGCCTCGACTGGAAGACCCCCGCCGAAGTGTTCGAAGAGCAGCTACGCTCACTCCAACAACCCGGTGTTGCAACGACCGGTTGA
PROTEIN sequence
Length: 480
VATKDWIAKTSEVPEGARRQWRADRALRPPMRSPGRPEPARAVQRQFWRLIATGITSAEAALKVGVSVPVGARWFRHAGGMPPISLAEPSGRYLSFEEREEIAILHAKNTGVREIGRAIGRDPGTVSRELRRNAATRGGKAEYRALVAQWKAQQAAKRPKTAKLASNDELREYVQERLAGGVRRPDGSIVVGPEPPAWKGLNKPHRQDRRWATAWSPEQISHRLKVDFPDDESMRISHEAIYQSLFIQGRGALKRELVACLRTGRALRQPRARAQNRPQGHVTADVVFSKRPAEAADRAVPGHWEGDLIIGTGRSAIGTIVERKSRSTLLVHLPRLDGWGETPPVKNGPALGGYGAAAMNAALTMSMTTLPEQLRQTLTWDRGKELSGHAQFALETGTKVFFADPHSPWQRPTNENTNGLLRQYFPKGTDLSRWSAEDLEAVALALNNRPRKSLDWKTPAEVFEEQLRSLQQPGVATTG*