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SCNpilot_cont_750_bf_scaffold_598_22

Organism: SCNpilot_BF_INOC_Rhodanobacter_69_30

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 3 ASCG 13 / 38
Location: 21257..21832

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Rhodanobacter denitrificans RepID=M4NI09_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 83.9
  • Coverage: 192.0
  • Bit_score: 324
  • Evalue 9.60e-86
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 83.9
  • Coverage: 192.0
  • Bit_score: 324
  • Evalue 3.00e-86
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGG90514.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.9
  • Coverage: 192.0
  • Bit_score: 324
  • Evalue 1.30e-85

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 576
ATGGATGACACCCGAGCCCCCGACCGCGCCCTGGTCGATGCCGTGCTGGCCTCGCGGCCGGGCGCGTTCGAACGCCTCGTGCGCGAGCACCAAGGGCTGTGCTGGCACATCATCCAGCGCATGGTGCGCAACCCGGAGGACACGCGCGAGCTGTGCCAGGACACCTTCCTGCGCGTGCACCAGTGCCTGCACCAGTACCGCGGCGAGAGCGCGCTGAAGTCCTGGATCGGCCGCGTGGCGTACACCATCGCCCTGCGTCACCTGCAGCACAGGCGCATCCCGCTGGTCGACGCGCACGACGATGAGGGTTTTCCGCTCACCGAAAACTTCGCCGACGACTTCGACCTGGAAACCGCCTGCGCGGACGCCGAAATCGCCGGCCATCTGCACGAAGCTATCGAGGCGCTGCCGCCCCTGCAGCGCACCGTGCTGACCCTGTACTACCTCGAGGAAAACTCCATCCCCGAGATCGCCCACATCACCGGGCTGGCCAGCGGTACCATCAAGAGCCACCTGTTCCGGTCGCGCCTGCGCCTGCGCGAGGCGCTGGAATCCCGCACGGGAGTTGCAGCATGA
PROTEIN sequence
Length: 192
MDDTRAPDRALVDAVLASRPGAFERLVREHQGLCWHIIQRMVRNPEDTRELCQDTFLRVHQCLHQYRGESALKSWIGRVAYTIALRHLQHRRIPLVDAHDDEGFPLTENFADDFDLETACADAEIAGHLHEAIEALPPLQRTVLTLYYLEENSIPEIAHITGLASGTIKSHLFRSRLRLREALESRTGVAA*