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SCNpilot_cont_750_bf_scaffold_6907_9

Organism: SCNpilot_BF_INOC_Rhodanobacter_69_30

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 3 ASCG 13 / 38
Location: 4385..7186

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.5
  • Coverage: 798.0
  • Bit_score: 1521
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 95.2
  • Coverage: 798.0
  • Bit_score: 1520
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WL14_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 95.5
  • Coverage: 798.0
  • Bit_score: 1521
  • Evalue 0.0

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2802
ATGACCTACTCGTTTACCGAGAAGAAGCGCATCCGCAAGGATTTCGGCAAGCGGCCCCCCGTGCTGGGCGTGCCCAACCTGCTGACCATCCAGACCGATTCCTACCGGGAATTCCTGCAGGAGCACACCGCTCCGAAACAGCGCGAAGACAAGGGTCTGCACGCCGCCCTGAAGTCGGTGTTCCCGATCGTGAGCTACTCGGGCAACGCCGCACTGGAATACGTGGACTACCGCCTCGGCGAGCCGGGCTTCGACGAGCGCGAGTGCCGCAACCGCGGCATGACCTTCGGCGCGCCGCTGCGCGTGACCGTGCGCCTGGTGATCTACGACAAGGACAGCCCGGCCTCGCGCAAGGCCGTGAAGTACGTCAAGGAGCAGGAGGTCTACATGGGCGAGATCCCGCTCATGACCGACACCGGCACCTTCATCATCAACGGCACCGAGCGCGTCATCGTCTCGCAGCTGCACCGTTCGCCGGGCGTGTTCTTCGACCACGACCGCGGCAAGACGCACAGCTCGGGCAAGCTGCTGTTCTCCGCCCGCGTGATCCCCTACCGCGGCTCGTGGCTGGACTTCGAGTTCGACCCGAAGGACGCGCTGTTCACCCGCATCGACCGTCGCCGTAAGCTGCCGGTGACCGTGCTGCTGCGCGCGCTGGGCTACAGCAACCAGGAGATGCTGGCGATCTTCTTCGAGCACAACGTGTTCCACCTCGGCAAGAAGGGTGGCACCACGCTGGAGCTGGTCGCCGAGCGCCTGCGCGGCGAGACGCTGTCGTTCGACCTCGCGGTCGGCGGCAAGGTGCTGGTGGAAGCGGGCAAGCGCATCACCGCGCGCCACGTGCGCCAGCTCGCGTCCGAGAACATCACCGCGCTGGAAGTGCCGGACGACTACCCGGTGGGCCGCATCCTCGCCACCGACATCGTCGACGCGAAGACCGGCGAGCTGCTGGCCTCGGCGAACGACGAGATCACCGCCGAGCAGCTGGAGAACTTCCGCAAGGCCGGCATCGAAGTCGTGCCCACGCTGTACGTGAACGACCTCGACCGCGGCGCCTACATCTCGCACACGCTGCGCATCGACAACACCCGCACCCCGCTCGAGGCGCTGGTGGAGATCTACCGCATGATGCGTCCGGGCGAGCCGCCGACGAAGGACGCCGCGCAGAACCTGTTCTTCAACCTGTTCTTCACGTTCGACCGCTACGACCTGTCGGCGGTGGGCCGGATGAAGTTCAACCGCCGCGTGGGCCGCAAGGACATCCTGGGCCCGGGCGTGCTGTACGACCACAAGTACTTCGGCGAGCGCAAGGAAGAGGCCGCGCAGGCGCTGGTCAAGGCGCAGGGCGACACCTCCGACATCCTCGACGTGCTGAAGGTGCTGATCGACATCAAGAACGGCCACGGCACCGTGGACGACATCGACCACCTCGGCAACCGCCGCGTGCGTTCGGTGGGCGAGATGACCGAGAACACGTTCCGCATCGGCCTGGTGCGCGTGGAGCGCGCGGTGCGCGAGCGCCTGTCGCTGGCCGAGGCCGACGGACTCACGCCGCAGGACCTGATCAACGCGAAGCCGGTGGCGGCCGCGGTGAAGGAGTTCTTCGGTTCCTCGCAGCTTTCGCAGTTCATGGACCAGAACAACCCGCTGTCGGAAGTGACGCACAAGCGCCGCGTCTCGGCGCTTGGCCCGGGCGGCCTGACCCGCGAGCGCGCCGGCTTCGAGGTGCGCGACGTGCACCCGACCCATTACGGCCGCGTCTGCACCATCGAGACGCCGGAAGGCCCGAACATCGGCCTGATCAACTCGCTCGCCGTGTACGCGCGCACGAACCAGTACGGCTTCCTGGAGACGCCGTACCGCAAGGTCGCGAACGCCAAGGTCACCGACAAGGTGGACTACCTGTCGGCGATCGAGGAAGGCGACCACGTGATCGCGCAGGCGAACTCGCCGCTGGACAAGCACGGCGCCTTCGTCGAGGAATTCGTGTCCTGCCGTTTCCGCGGCGAGTCCGAACTGCGTCCGGCGGCCGAAGTCGACTACATGGACGTCTCTCCGATGCAGACCGTGTCGGTGGCGGCGGCGCTGGTGCCGTTCCTGGAGCACGACGACGCGAACCGCGCGCTGATGGGCGCGAACATGCAGCGCCAGGCCGTGCCGACGCTGCGCTCGCAGACCCCGCTGGTGGGCACCGGCATCGAGCGCGCCGTGGCGCGCGACTCCGGCGTCACCGTCAGCGCGAAGCGCGGCGGCCTGATCGACCAGGTCGACGCCGGCCGCATCGTGGTGCGCGTGAACGAGGACGAGGTGGGCGAGAACGACGCCGGCGTCGACATCTACACGCTGACCAAGTACACCCGCTCCAACCAGAACACCAACCTCAACCAGCGTCCGCATCGCGTTCATGCCGTGGAACGGCTACAACTTCGAAGACTCGATCCTGCTCTCCGAGCGTGTCGTGCAGGAAGACCGCTACACCTCGATCCACATCGAGGAGCTGTCCTGCATCGCGCGCGACACCAAGCTGGGCGCCGAGGAAATCACCGCCGACATCCCGAACGTGGGCGAGCAGGCGCTGGCGCGCCTGGACGAGTCGGGCATCGTCTACATCGGTGCCGAGGTGAAGGCCGGCGACATCATGGTCGGCAAGGTCACGCCGAAGGGCGAGAGCCAGCTGACCCCGGAAGAGAAGCTGCTGCGCGCGATCTTCGGCGAGAAGGCATCCGACGTGAAGGACAGCTCGCTGCGCGTGCCGCCGGGCATGGACGGCACCGTCATCGACGTGCAGGTGTTCACCCGTGA
PROTEIN sequence
Length: 934
MTYSFTEKKRIRKDFGKRPPVLGVPNLLTIQTDSYREFLQEHTAPKQREDKGLHAALKSVFPIVSYSGNAALEYVDYRLGEPGFDERECRNRGMTFGAPLRVTVRLVIYDKDSPASRKAVKYVKEQEVYMGEIPLMTDTGTFIINGTERVIVSQLHRSPGVFFDHDRGKTHSSGKLLFSARVIPYRGSWLDFEFDPKDALFTRIDRRRKLPVTVLLRALGYSNQEMLAIFFEHNVFHLGKKGGTTLELVAERLRGETLSFDLAVGGKVLVEAGKRITARHVRQLASENITALEVPDDYPVGRILATDIVDAKTGELLASANDEITAEQLENFRKAGIEVVPTLYVNDLDRGAYISHTLRIDNTRTPLEALVEIYRMMRPGEPPTKDAAQNLFFNLFFTFDRYDLSAVGRMKFNRRVGRKDILGPGVLYDHKYFGERKEEAAQALVKAQGDTSDILDVLKVLIDIKNGHGTVDDIDHLGNRRVRSVGEMTENTFRIGLVRVERAVRERLSLAEADGLTPQDLINAKPVAAAVKEFFGSSQLSQFMDQNNPLSEVTHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCTIETPEGPNIGLINSLAVYARTNQYGFLETPYRKVANAKVTDKVDYLSAIEEGDHVIAQANSPLDKHGAFVEEFVSCRFRGESELRPAAEVDYMDVSPMQTVSVAAALVPFLEHDDANRALMGANMQRQAVPTLRSQTPLVGTGIERAVARDSGVTVSAKRGGLIDQVDAGRIVVRVNEDEVGENDAGVDIYTLTKYTRSNQNTNLNQRPHRVHAVERLQLRRLDPALRACRAGRPLHLDPHRGAVLHRARHQAGRRGNHRRHPERGRAGAGAPGRVGHRLHRCRGEGRRHHGRQGHAEGREPADPGREAAARDLRREGIRREGQLAARAAGHGRHRHRRAGVHP*