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SCNpilot_cont_750_bf_scaffold_27884_2

Organism: SCNPILOT_CONT_300_BF_Microbacterium_70_39_partial

near complete RP 45 / 55 BSCG 47 / 51 MC: 2 ASCG 7 / 38
Location: 1286..1447

Top 3 Functional Annotations

Value Algorithm Source
truA; pseudouridylate synthase; K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] similarity KEGG
DB: KEGG
  • Identity: 85.2
  • Coverage: 54.0
  • Bit_score: 99
  • Evalue 3.40e-19
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.2
  • Coverage: 54.0
  • Bit_score: 99
  • Evalue 1.50e-18
tRNA pseudouridine synthase A n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NEJ4_MICTS similarity UNIREF
DB: UNIREF100
  • Identity: 85.2
  • Coverage: 54.0
  • Bit_score: 99
  • Evalue 1.10e-18

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Taxonomy

Microbacterium testaceum → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 162
GTGCGGATCAGGCTCGACATCGCGTACGACGGGACGCATTTCCGCGGCTGGGCGCGCCAGCCGGGTCTTCGCACCGTGCAAGGCGCACTCGAGGACGCCATCGCGCGCATCCTCGGCGGAGAGGTCTCGCTGGTCGTCGCCGGACGGACGGATGCCGGAGTG
PROTEIN sequence
Length: 54
VRIRLDIAYDGTHFRGWARQPGLRTVQGALEDAIARILGGEVSLVVAGRTDAGV