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SCNpilot_cont_750_bf_scaffold_6446_4

Organism: SCNPILOT_EXPT_750_BF_Rhizobiales_65_15

partial RP 37 / 55 MC: 1 BSCG 39 / 51 MC: 1 ASCG 9 / 38
Location: 3705..4259

Top 3 Functional Annotations

Value Algorithm Source
Putative TrapT family, dctQ subunit, C4-dicarboxylate transport n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ES36_BRASB similarity UNIREF
DB: UNIREF100
  • Identity: 71.5
  • Coverage: 165.0
  • Bit_score: 245
  • Evalue 5.50e-62
C4-dicarboxylate ABC transporter permease {ECO:0000313|EMBL:KGE02011.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.9
  • Coverage: 165.0
  • Bit_score: 299
  • Evalue 2.60e-78
TRAP C4-dicarboxylate transport system subunit DctQ similarity KEGG
DB: KEGG
  • Identity: 71.5
  • Coverage: 165.0
  • Bit_score: 245
  • Evalue 1.70e-62

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Taxonomy

Rhizobium sp. YS-1r → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 555
ATGACAGGCGACGCCAGCGTTCGGCCGCCCGCAGCGGCGCAGCCGCCGAAGAACGCGATGGACCGGTTCATCGAGGGCATAGAGTGGATCGCGGCCGGTTTTGTCGGGCTGGTCGCGGCCGACATCTTCATCTCGGTCCTGCTGCGCTACTTCTTCTCGGTCTCGATCCCCGACGGCTACGATTTCGGCCGGCTGTTCCTCGGCATCCTGATCTTCTGGGGCATTGCCGCGACGAGCTACCGCGGCACCCACATCACCGTCGACCTGATCTGGGACTCCGCCGGGCCGCGGGCGAAGCGGCTGATCGACATCTTCGCCACGCTGGTCCTGCTGCTGGTCGTGACGGTGCAGACGATCATGCTCTTCGACAAGGTCGTGGCGACCAAGGCGCAGAACGTCCTCACCTACGACCTGCAACTGCCGACCTGGCCGTTCTTCGCGCTCGCCTGGCTCGGCGACGTCTCGGCCGTGATCCTGATCGCGGTGCGCACCTTCCGGCTCGTCTTCCACCCCGAGCGGGTGAACGAGGAGCATTCCCTCGAACCTGTCGAGTAG
PROTEIN sequence
Length: 185
MTGDASVRPPAAAQPPKNAMDRFIEGIEWIAAGFVGLVAADIFISVLLRYFFSVSIPDGYDFGRLFLGILIFWGIAATSYRGTHITVDLIWDSAGPRAKRLIDIFATLVLLLVVTVQTIMLFDKVVATKAQNVLTYDLQLPTWPFFALAWLGDVSAVILIAVRTFRLVFHPERVNEEHSLEPVE*