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SCNpilot_cont_750_bf_scaffold_9078_5

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

partial RP 5 / 55 BSCG 11 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 3007..3582

Top 3 Functional Annotations

Value Algorithm Source
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1515746 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella sp. YQH10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.6
  • Coverage: 190.0
  • Bit_score: 134
  • Evalue 2.00e-28
DNA polymerase III subunit beta (EC:2.7.7.7) similarity KEGG
DB: KEGG
  • Identity: 42.0
  • Coverage: 188.0
  • Bit_score: 125
  • Evalue 2.10e-26
DNA polymerase III subunit beta n=1 Tax=Pseudomonas denitrificans ATCC 13867 RepID=M4WQD8_PSEDE similarity UNIREF
DB: UNIREF100
  • Identity: 42.0
  • Coverage: 188.0
  • Bit_score: 125
  • Evalue 6.60e-26

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Taxonomy

Shewanella sp. YQH10 → Shewanella → Alteromonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 576
ATGCACTTCCAGATCGCCCGCGCCGAACTGCAGCGCCAGCTCCACCATGTCGCCGGCGCCGTCGCTCGCGGCACAGGCTTCCACGGTTTGCCGATCCTGGGGAATGTCCTCGCGGAGATCCGTGGTTCCCAGCTACGCCTCACTGGTTCCGACAGCGAGGTAACGATGTCGGGCATCTGCAGCGTGACCGAGGCATCGGAGGACACCGCCATCACCGTGCCCGCCAAGAAGCTCTTGGACATCGTCCGGGCGCTGCCGAGTTCAGTGTCCACCGTCGACGCGCGCCTCGTGGAGACCGGCAATCTGCAACTGCGCGCGGGGACCGGGCGCTACACGCTGGCCACTCTGCCTGCGGCCGGCTACCCGGAACGGCCGGCCATCGGCGATGCCACGCGGATCACCGTGAGCGATGCCTTGTTGAGCACCATGACGCAGTCGGTGAGCTACGCAATGGCCAACGGCGACAAGCGCGCCTACCTGAAGGGCGTGCTCCTGCATCTGGCCGGGCCGACCATCACGTGCGACGGCACGGACGGTTCGCGCATGGGCGTTGCCCGGTCGGCCCTGTCGGAGCGC
PROTEIN sequence
Length: 192
MHFQIARAELQRQLHHVAGAVARGTGFHGLPILGNVLAEIRGSQLRLTGSDSEVTMSGICSVTEASEDTAITVPAKKLLDIVRALPSSVSTVDARLVETGNLQLRAGTGRYTLATLPAAGYPERPAIGDATRITVSDALLSTMTQSVSYAMANGDKRAYLKGVLLHLAGPTITCDGTDGSRMGVARSALSER