ggKbase home page

SCNpilot_cont_750_bf_scaffold_10850_4

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

partial RP 5 / 55 BSCG 11 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(2342..4606)

Top 3 Functional Annotations

Value Algorithm Source
Type-IV secretion system protein TraC n=1 Tax=Xanthomonas vesicatoria ATCC 35937 RepID=F0B9P2_9XANT similarity UNIREF
DB: UNIREF100
  • Identity: 47.1
  • Coverage: 768.0
  • Bit_score: 738
  • Evalue 8.40e-210
Uncharacterized protein {ECO:0000313|EMBL:KHD60335.1}; TaxID=317013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. phaseoli.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.3
  • Coverage: 768.0
  • Bit_score: 739
  • Evalue 4.10e-210
Sex pilus assembly; K12063 conjugal transfer ATP-binding protein TraC similarity KEGG
DB: KEGG
  • Identity: 36.9
  • Coverage: 776.0
  • Bit_score: 544
  • Evalue 5.60e-152

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Xanthomonas axonopodis → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2265
CGCCTCGGGTTCGGGGTGATGGCCAAGCCGATTGCCGGCTTTGACCAGCAGATGGGCGAGGCCCTGAACGCCCTGCTCAATGTCCCCTTTCCGCCTGGGACTATTCTCCAGTTCTGCCTCTACGCATCGCCTGACATTGAAGAAGTGCTGCTGCGCTTCGAGATGATGCGCCAGTACGAAACCGATCCGACCCTGTGCGAGATGACCCGGCAGCGCATCGGCTTCTTGCGTGGCCTCACGCAGCGTCCGATTGGCCAGGTCGCCGGCGCACGGATGCGCCAGATGCGCCTGGTTATCTGCGCTTCGATCAAGGAAGGCGAGACGGATCCGACGTTCGAGGAAATGACCCGTATCCGCGAGCTGCAGCAAAACTTCGAAGCGGCCCTGAAGACCATCGGGTTCAAGTACGACCGGCTAACCGCAGGCTCCTACGTCCGTTTCATGGAGTCCATCCTCAACCAAGGGCCGGAAGCCATCTGGCGGCGTTCCGCGCAGTCGGATCACGAAGAAGGCGAGTTGCTGTGCAACCAGCTGCTGGATCCGGATGTGGCCATCGAGGTTGACGCCGACGAGATCCGGCTTGGCGACCATTGCCACGTGCGCATCCAGCATCCGAAGCGCTACCCGGACTACCTCTACCCAGGTCTGGCCCAGTACTACATGGGCGACATCATGAAGGGCATGCGCGCAATGCGCGACCCGGTGCTCTACACGGTCAACATCCTGTACCCCGATCACGAGACGCGCCGCAGTGCGCTTCTCCGCGACTTCCAGTGGGCGACCCGCAACGCCGAAGGGCGGCTGGCCCGGTTCGTCCCCGAATACGCGCAGCGTGCCAACAGCCTGCGCATCATGAACGACGCGATCAACAAGGGTGACCGCATCGTCTACGCGTACATCTCCGCCGCGACGTTCTCTGACACACGCGAGCAGTCGATCCAGGCCGCCACTGCCGTCCAAGGCATGTTCCGCACAGCGGGTTTTCAGACGTTGCCGGATCGCTATGCGCTGCACGCGATGTTCGCGCAGATGATGCCCTTTGCGGCCGAGGAAGACGCGCGTCAGTTCCTCGGCAGCTATCGCACCATGGCGACGTCGCACGTGGTCCCGATGCTCCCGGTGATCGGTAGCTGGGGCGGCAGCTACAACCCGTTGCTCACGCTGATCGCCCGCGACGGCCAGCTCATGCCTTGGTCGCCCTACGACAGCGACAACAATTTCAATATCGTGATCGCGGCGCAGTCGGGCTCCGGTAAGAGCTTCTTGGCCAACAACATCGTTTCCAATTTCCTGTCGATCGGCGGCCGCGCCTGGATCATCGACAAGGGCTACTCGTACAAGAAGCTGTGCGAGCAGCAGGGTGGCGAGTACATCGAGTTCACCGACGACACCGATCTCTGCCTCAACCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCCAGATTCCCGCTGTGATGCGTATCCTCACCGAACAGTGGGATATCCACGGGAAGAAGTTGACTATCGATCAGCTCGCGGACGCCTGCCTCGCGGAGGACGACGACCGCATCCGCGACGTTGGCCACCAGCTGTTCGCGTTCACCACCAAGGGTCAGTACGGTCGCTTCTTCAACGGCGAGTCAAATGTCGACCTAAACAACCGCCTGGTCGTGCTCGAGCTGCAGCAGCTGTCCGGCCGCGAGCACCTCCAGCGTCTCGTGCTGCTGCAGATCATGTATGCGATCCAGCAGTCGATGGACAATCTCCCGCGCGACATGCCCAAGATCATTCTGATCGACGAGGCGTGGCAGTTGCTGAGTTCGGGGGAGACCAAGACCTTCATTGTCGGCTGGTACCGCCAGCTGCGAAAGTTCGGCGCTACGGCTGCGATCTGTACGCAGTCGATCAACGACTTCTACGCCTCGGCTGGTTCGGAGGCGATCGTGGAAAACTCGGCGCACAAGCTCCTTCTTGGTCAGAAGAAAGAGTCGATCCAGATGGTCAAGCAGACGGGCCGCCTTCCGATGTCCGATGGCGAGTATGCGCTGCTCGAGTCGGTGCACACCGTGAAGGGCGAGTACTCAGAGATCATGTTCAGCGGCCCAGCCGGCACAGGCGTCGGGCGCCTCGTCGAGTCGGACTTCAACCTTCTCCTTTTCTCCTCCGATGCGCGCGACGTCAGCGCCATCAAGGCGTTCACGGATCAGGGGATGAGCACGGTCGAAGCCATCAAGGAAGTGCTCCGCCAGCGCGGTAAGTCGAGCGAGGCCAAAGCGGCATGA
PROTEIN sequence
Length: 755
RLGFGVMAKPIAGFDQQMGEALNALLNVPFPPGTILQFCLYASPDIEEVLLRFEMMRQYETDPTLCEMTRQRIGFLRGLTQRPIGQVAGARMRQMRLVICASIKEGETDPTFEEMTRIRELQQNFEAALKTIGFKYDRLTAGSYVRFMESILNQGPEAIWRRSAQSDHEEGELLCNQLLDPDVAIEVDADEIRLGDHCHVRIQHPKRYPDYLYPGLAQYYMGDIMKGMRAMRDPVLYTVNILYPDHETRRSALLRDFQWATRNAEGRLARFVPEYAQRANSLRIMNDAINKGDRIVYAYISAATFSDTREQSIQAATAVQGMFRTAGFQTLPDRYALHAMFAQMMPFAAEEDARQFLGSYRTMATSHVVPMLPVIGSWGGSYNPLLTLIARDGQLMPWSPYDSDNNFNIVIAAQSGSGKSFLANNIVSNFLSIGGRAWIIDKGYSYKKLCEQQGGEYIEFTDDTDLCLNPXXXXXXXXXXFQIPAVMRILTEQWDIHGKKLTIDQLADACLAEDDDRIRDVGHQLFAFTTKGQYGRFFNGESNVDLNNRLVVLELQQLSGREHLQRLVLLQIMYAIQQSMDNLPRDMPKIILIDEAWQLLSSGETKTFIVGWYRQLRKFGATAAICTQSINDFYASAGSEAIVENSAHKLLLGQKKESIQMVKQTGRLPMSDGEYALLESVHTVKGEYSEIMFSGPAGTGVGRLVESDFNLLLFSSDARDVSAIKAFTDQGMSTVEAIKEVLRQRGKSSEAKAA*