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SCNpilot_cont_750_bf_scaffold_13456_3

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

partial RP 5 / 55 BSCG 11 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 573..1403

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.2
  • Coverage: 276.0
  • Bit_score: 455
  • Evalue 5.60e-125
shikimate dehydrogenase (EC:1.1.1.25) similarity KEGG
DB: KEGG
  • Identity: 80.1
  • Coverage: 276.0
  • Bit_score: 440
  • Evalue 4.20e-121
  • rbh
Shikimate dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUD9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 81.2
  • Coverage: 276.0
  • Bit_score: 455
  • Evalue 4.00e-125
  • rbh

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 831
ATGCAGCCCGCCCAGTTCGCCGTGTTCGGTCACCCGATCAGCCACAGCCTGTCGCCGGCGATCCACCAGGCGTTCGCGCAGCAGTGCGGCATCGAGCTGGCATACCGCGCGATCGACGTGCCGCCGGCCGACTTCGCCGATGCGGTGCGGCGCTTCTTCGCCGATGGCGGCCGCGGCGCCAACGTCACCTTGCCGCACAAGGCGGCCGCGTTCGCGCTGGCCGACCAGCACAGCGTGGCAGCCACGCGGGCCGGCACGGCCAACGTGCTGACCCGGCTGGAGGACGGCCGTCTGGCGGCGCACAACACCGACGGCGACGGCATGGTGCGCGATCTGGCCGAACGCCACGAGATCGACCTGCGCGGCCATGACACCTTGCTGCTCGGTGCCGGCGGCGCAGCGCGCGGGGTGGCCTGGCCGCTGCTCGATGCCGGCGTGCGATCGCTGACCATCGTCAATCGTTCGCCGGCGGCGGCCGACGCGCTGGCCGACGCCATTGGCGAGCCGGCGCGGGTGCGTACCCGCTACTGGGACGACCTGGCCACCATCGGCAGTTTCGACCTGATCGTCAACGCCACCTCGGCTGGCGTGCTCGGCGCGGCGCTGCAACTGCCGTTTGCCCTGCTCGGCAGCCGCGCAGTGTGCTACGACCTGTCCTACGGCCAGGCCGCCGCCGGTTTCATCGGCTGGGCCCGCGCGGCCGGCGCGCGCTACGCCTGCGACGGCCTGGGCATGCTGGTGGAAACCGCGGCCGACGCCTTCGCGCTGTGGCATGGCCAGCGACCGGACACCGAGCCGGTGTACCAAACCTTGCGCCGGCAAACGGCCTGA
PROTEIN sequence
Length: 277
MQPAQFAVFGHPISHSLSPAIHQAFAQQCGIELAYRAIDVPPADFADAVRRFFADGGRGANVTLPHKAAAFALADQHSVAATRAGTANVLTRLEDGRLAAHNTDGDGMVRDLAERHEIDLRGHDTLLLGAGGAARGVAWPLLDAGVRSLTIVNRSPAAADALADAIGEPARVRTRYWDDLATIGSFDLIVNATSAGVLGAALQLPFALLGSRAVCYDLSYGQAAAGFIGWARAAGARYACDGLGMLVETAADAFALWHGQRPDTEPVYQTLRRQTA*