ggKbase home page

SCNpilot_cont_750_bf_scaffold_17508_1

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

partial RP 5 / 55 BSCG 11 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 1..969

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.4
  • Coverage: 304.0
  • Bit_score: 544
  • Evalue 1.40e-151
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVF2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 92.4
  • Coverage: 304.0
  • Bit_score: 544
  • Evalue 1.00e-151
S-adenosyl-methyltransferase MraW similarity KEGG
DB: KEGG
  • Identity: 89.6
  • Coverage: 309.0
  • Bit_score: 542
  • Evalue 1.20e-151

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 969
GGCGGAATCATGCGGGATGGGGCGGGAGTGCGCTCGGTGCAAGTGCAGCGTGTCCCGGTGATGCTGGGCGAGGCGGGGGAGGGATTGTCCGTGCAGGCAGACGGGCGCTATCTGGACGGCACGTTCGGGCGCGGTGGTCATGCGCGCGCGGTGCTGTCGCGCCTGGGTCCGGCCGGCCGGCTCTTGTTGATGGATCGCGATCCGGCCGCGATCGCCGCTGCGCGGGCCGAGTTTGCCGCCGACGCACGGGTGGCGATCCGCCACGCCAACTTCTCCAGCCTGGCCGAGTGGGACGAGACCGCCGCCGGGCTCGACGGCGTGCTGCTCGACCTGGGCGTCTCGTCGCCGCAACTGGACGAGGCCGCGCGCGGCTTCAGCTTCATGGCCGATGCGCCGCTGGACATGCGCATGGACACCACGCAGGGCGAGAGCGCCGCCGATTTCCTCGCTCACGCCAGCGAGCGCGAGATCGCCGACGTGCTGTGGAATTACGGCGAGGAGCGCCACAGCCGGCGCATCGCCCGCGCCATCGTGGCCGATCGCGACGCCACCCCGTTCACCCGCACCGGCCAGCTGGCCGCGCTGATCGAGCGCGTGGTGGGCCGGCGCGAGCCGGGCAAGCATCCGGCCACGCGCAGCTTCCAGGCGCTGCGCATTCGCGTGAACGGCGAGCTGGACGCCTTGCGGCAGGGTCTGGACGCCGCGCTGGAACGGCTCAAGCCGGGCGGGCGGCTGTCGGTGATCAGTTTCCACTCGCTGGAGGATCGCGCGGTGAAGCTGTTCATCCGCGACCACTCCGGACGCGTGCAGAACAGTCGTCGCGGACCGCCAGTGCAGGGGGCGCCGGCGCAGTTGGTGGCAATCGGCAAGGCGCAATTCCCGTCCGAGGCCGAGCTGGCCGCCAATCCGCGGTCACGCTCGGCGGTGCTGCGCGTGGCCGAGAAGCTGCCGCGGGAGGTCGCCGCGTGA
PROTEIN sequence
Length: 323
GGIMRDGAGVRSVQVQRVPVMLGEAGEGLSVQADGRYLDGTFGRGGHARAVLSRLGPAGRLLLMDRDPAAIAAARAEFAADARVAIRHANFSSLAEWDETAAGLDGVLLDLGVSSPQLDEAARGFSFMADAPLDMRMDTTQGESAADFLAHASEREIADVLWNYGEERHSRRIARAIVADRDATPFTRTGQLAALIERVVGRREPGKHPATRSFQALRIRVNGELDALRQGLDAALERLKPGGRLSVISFHSLEDRAVKLFIRDHSGRVQNSRRGPPVQGAPAQLVAIGKAQFPSEAELAANPRSRSAVLRVAEKLPREVAA*