ggKbase home page

SCNpilot_cont_750_bf_scaffold_18626_3

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

partial RP 5 / 55 BSCG 11 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(1022..1996)

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 88.3
  • Coverage: 324.0
  • Bit_score: 563
  • Evalue 3.80e-158
Pseudouridine synthase n=1 Tax=Rhodanobacter denitrificans RepID=M4NBA3_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 88.3
  • Coverage: 324.0
  • Bit_score: 563
  • Evalue 1.20e-157
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 89.5
  • Coverage: 325.0
  • Bit_score: 569
  • Evalue 3.10e-159

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA1_FULL_Rhodanobacter_67_6_curated → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 975
ATGACCACCATACGGCAGCAGGCGGAGGTTCCGCTGAGTGCAGCAGGCCGTCGCTTCGACCAGGCTTTGGCCGAGATGTTCCCCGCCTATTCGCGTTCGCGGCTCAGCGGCTGGATCAAGGCCGGCGCGGCGACCCTGGATGGCGCCCCGGCTGCGCCGCGGCAACTGCTGCGCGGCGGCGAGCGGGTCGAGCTGGATGTCGAACTGGAAACGGAAGTGCACAGCCAGCCCGAGGCGATTGCGCTGACGATCGTGTACGAGGATGCCGACCTGCTGGTGCTGGACAAGCCCGCCGGACTGGTGGTGCATCCCGGCGCCGGCAACCCGGCCGGCACGCTGCTCAACGGCTTGCTGCACCACGACCCGCAGCTGGCCGAGCTGCCGCGCGCCGGCATCGTGCATCGGCTGGACAAGGACACCTCCGGCCTGATGGTGGTGGCCAGGACGCTGTCCACCCATACCGCGCTGGTCGATCTGCTCTCGCGGCACGAAGTGGAACGCCAGTACGAAGCCGTGGTGATGGGCACGATGGTGGCCGGCGGCACGGTGGACCAGCCGATCGGCCGCAGCATGGGCGACCGCCTGCGCCAGGCCGTGCGTGACGAGGAGGACGGCAAGCGCGCGGTGACCCATTACCGCGTGCGCGAGCGCTTCCGCGCGCACAGCCTGCTGCAATGCCAGCTGGAAACCGGCCGCACCCACCAGATCCGCGTGCACCTGGCGCACATCGGCCACCCGCTGATCGGCGACCCGTTGTACGGCGGCGGCCTCAAGTTGCCCAAGGGCGCCAGTGACGGCCTGGTCGCCGCCTTGCGCGGCTTCCGCCGGCAGGCGCTGCACGCGGAGAAACTCTCGTTCGTGCATCCGGTCACCGGCGAGGCGCTGTCGTTCACGGCCGAGCGCCCCGCCGATCAATTGGCCCTGATCGAGGCGCTGCGTGCGGATCTGGCCGAACACGGTCCGGACCCGTATTGA
PROTEIN sequence
Length: 325
MTTIRQQAEVPLSAAGRRFDQALAEMFPAYSRSRLSGWIKAGAATLDGAPAAPRQLLRGGERVELDVELETEVHSQPEAIALTIVYEDADLLVLDKPAGLVVHPGAGNPAGTLLNGLLHHDPQLAELPRAGIVHRLDKDTSGLMVVARTLSTHTALVDLLSRHEVERQYEAVVMGTMVAGGTVDQPIGRSMGDRLRQAVRDEEDGKRAVTHYRVRERFRAHSLLQCQLETGRTHQIRVHLAHIGHPLIGDPLYGGGLKLPKGASDGLVAALRGFRRQALHAEKLSFVHPVTGEALSFTAERPADQLALIEALRADLAEHGPDPY*